Gene Psyr_3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3446 
SymbolfliN 
ID3368973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4109479 
End bp4109937 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content57% 
IMG OID637653797 
Productflagellar motor switch protein 
Protein accessionYP_236516 
Protein GI66046675 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.686911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.950111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG AAAACGATAT GACGTCTGCT GAAGACCAGG CATTGGCCGA TGAATGGGCT 
GCTGCCTTGG GCGAAGCTGG CGACAGTCAG GCTGATATTG ATGCGTTGCT GGCTGCGGAC
GCCGGGAATT CGGGTAGCCG GATGGCCATG GAAGAGTTTG GCAGCGTGCC GAAAAGCACT
GGTCCGGTTT CTCTGGATGG TCCCAATCTG GATGTGATTC TCGACATTCC GGTATCGATC
TCCATGGAAG TGGGCAGCAC CGACATTAAC ATTCGCAACC TGTTGCAGCT CAACCAGGGC
TCGGTGATCG AGCTGGATCG TCTGGCGGGC GAACCGCTGG ATGTGCTGGT CAACGGCACA
CTGATCGCGC ATGGCGAAGT GGTGGTGGTC AACGAAAAGT TCGGCATCCG TCTGACCGAC
GTGATCAGCC CGAGCGAACG CATCAAGAAG CTGCGCTAA
 
Protein sequence
MADENDMTSA EDQALADEWA AALGEAGDSQ ADIDALLAAD AGNSGSRMAM EEFGSVPKST 
GPVSLDGPNL DVILDIPVSI SMEVGSTDIN IRNLLQLNQG SVIELDRLAG EPLDVLVNGT
LIAHGEVVVV NEKFGIRLTD VISPSERIKK LR