Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3446 |
Symbol | fliN |
ID | 3368973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4109479 |
End bp | 4109937 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637653797 |
Product | flagellar motor switch protein |
Protein accession | YP_236516 |
Protein GI | 66046675 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.686911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.950111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG AAAACGATAT GACGTCTGCT GAAGACCAGG CATTGGCCGA TGAATGGGCT GCTGCCTTGG GCGAAGCTGG CGACAGTCAG GCTGATATTG ATGCGTTGCT GGCTGCGGAC GCCGGGAATT CGGGTAGCCG GATGGCCATG GAAGAGTTTG GCAGCGTGCC GAAAAGCACT GGTCCGGTTT CTCTGGATGG TCCCAATCTG GATGTGATTC TCGACATTCC GGTATCGATC TCCATGGAAG TGGGCAGCAC CGACATTAAC ATTCGCAACC TGTTGCAGCT CAACCAGGGC TCGGTGATCG AGCTGGATCG TCTGGCGGGC GAACCGCTGG ATGTGCTGGT CAACGGCACA CTGATCGCGC ATGGCGAAGT GGTGGTGGTC AACGAAAAGT TCGGCATCCG TCTGACCGAC GTGATCAGCC CGAGCGAACG CATCAAGAAG CTGCGCTAA
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Protein sequence | MADENDMTSA EDQALADEWA AALGEAGDSQ ADIDALLAAD AGNSGSRMAM EEFGSVPKST GPVSLDGPNL DVILDIPVSI SMEVGSTDIN IRNLLQLNQG SVIELDRLAG EPLDVLVNGT LIAHGEVVVV NEKFGIRLTD VISPSERIKK LR
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