Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3418 |
Symbol | |
ID | 3368945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4081543 |
End bp | 4081995 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653769 |
Product | PilT protein, N-terminal |
Protein accession | YP_236488 |
Protein GI | 66046647 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.317439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0554428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCTGC TCGACACCAA CGTGGTTTCA GAGCTCAGAA AGCGCACTGC AGACGCCAAT GTGCTGCGCT GGTCGCGAAC ACAAATGGCC TCCAGCCTGT TCATCTCGTC CATCACGATT CTTGAACTCG AAACAGGTAT CCTGCGCATC GAACGCCGCG ACCCGACACA AGGCGCAATA TTGCGAATGT GGCTCGACCA GCATGTATTG AAGGCGTTCG CCGGGCGTAT CCTGACCGTC GACATTCAGG TCGCTAGGCG CTGCGCGCAA TTGCACGTTC CCGACCCGCG CAGCGAATGC GATGCGTTGA TCGCCGCCAC TGCGCTGGTG CATGGCATGA CCGTGGTCAC ACGCAACACA ATGGACTTTC AGTCGTGCGG GGTCGCGCTG CTCAATCCCT GGGTCAGCCA GTTGAATGAA GAAGCGGCCG TTTATTCACG TGCAGCACGT TGA
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Protein sequence | MFLLDTNVVS ELRKRTADAN VLRWSRTQMA SSLFISSITI LELETGILRI ERRDPTQGAI LRMWLDQHVL KAFAGRILTV DIQVARRCAQ LHVPDPRSEC DALIAATALV HGMTVVTRNT MDFQSCGVAL LNPWVSQLNE EAAVYSRAAR
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