| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3410 |
|---|
| Symbol | |
|---|
| ID | 3368937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 4073399 |
|---|
| End bp | 4076032 |
|---|
| Gene Length | 2634 bp |
|---|
| Protein Length | 877 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637653761 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_236480 |
|---|
| Protein GI | 66046639 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00835296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.27975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAC TACAGACTTC ACCTGCACTG CCTGTTCCAC TGCCCTTGAG CTATAACCCT
CAAGGCATTG GCGATGTTGA CGTAGCAGAC CCCGCCAAGC CGATAGAAAT ACTGATCGGC
CCTATCAACC TCAAGCCAAA AGATCGGATC GACCTGTTCT GGGGCACACA CAATGAGGTT
ATTGATACCT ACACACACTC TTCAGACTCA CCGAACACCA ATGGCTTTTT TTCATTGTAT
GTGGATACCC GCTGGGTCCA GTCAGGCCTT ACTGATGTCA ACTATCTCTA TACACCGTTC
CCCTCCAATA TCCAGGAACA TTCGCCTGTT AACAAAATAG TCGTCAAACT GGAAATCCCC
GGTGGTCGGG ATCCCGACCC AGCCACACCC TACGAAAATG AAAAGCTCGA CATCCCGACC
GTCAACCCGT CTGGCGTGAT CACCTCACCT GAGGGGGTAA GCGTTACCCT CGACGCTTAC
GAAAATATGG CTGCAGGGGA TTCGATTTTC ATCTATTGGC ACGGCATCAG AGTCGAACAC
CCTCCTCTGA CAGCAGACCA GCTTGGTAAA CCGGTCACTG TGAGTATCGA CAAGCAGATT
ATTATCGAAG CAGGGGACTC GGAAAATATT GTTGTCCGGT ACGATGTCAG GGATATCGTC
AATAACTGGT CACGCTTCTC TTTCCCAGCC TATGTTGCAG TCGAGGCTGG CAACTCCAGC
CTGCAGGCCC CTATCGCCCC ACAGGCGCCC AACATGGAGC TTGATCTCGA TAAGCTGGCC
GGCGCAGATG TTCAAGCGCT CGTGCTGTCA CATGCCAGTA TCGCCACTGG TGACATCATA
AACTTCGTGA TGGAGCGTAA CACTGCAGAA GGCATTCAGC TGGAGTCCTT CACCGCATCA
AAAGTGGTTC AGATACCTGG CAGCTTCGTG GAGTTTCTCA TCCCCAATGA ACAGTTCCAT
CCCATCGCAC AGGGCCGGGC ACGTTTGAAA TACACAGTGA TCAAAGGCAC TGGCGAGGCA
TTGCGTTCAA AGAGTCTGAC TCTCGCAGTA CTCGGTCAAC CGCAGCAACT GTCATTGCCA
CATGTCCAAG GCGTCACCAA TGGAATTCTG AACCCTGATA GTCACAATGT GATCACTCAG
GTGCCGCCTT ATTACTTTAT GGCGGACGGC CACGACATCA ATCTGGTATG GATTGGCAAG
GCTGCCAACG GTGAGACGGT CATGCATCAG GAGGTTAAAA ACCTGAATGC TGATGATATC
GGCAAGGGCA TCGAGTATTT GATCCCGGAT GAAAAGGTGA GTGCATTGGC AGGCGGTTCA
CTTGAGGTTT ACTACACCGT AACCACCTAC GCGAGAGCGT TCTTCAAATC GCCCATACTA
CGGTTGCTCG TGGACGTGGA TAACAGCAGT CCGCTGGAAG CTCCTGCCGT AGACAAGCTG
AGTGCGGACG GCATTCTCGA CCCGGCCGAT ATACCACTCG AAGCCATTGT TCGCGTGTTG
CCTTATCGCG CAATGGCTGA GGGAGACAAA GTCACCATTC ACTGGGAAGG CGGTGATGCA
GGGGGCACCT ACAGCACATA CACCGTTATC AATACAGGAA CCGTCAACAG GGAAACCGTA
TTCCGCATTC CCAAACGGTA CATCGATGCC AATCTAAACG GGCTGGTACA GGTCTGGTAT
ACGGCGCAAC ATGGAGACAG AATTGCTGAA TCGCAGAGAT TGGCAATTAC TATCCGTGAG
AGCGTGGCAC TGCCCCTCCC CACCCCCACC CTAAAAGAAG CCACCGGCAC CACGCTCGAC
CCGGCCAACG CTTCATCCGG CGCAACCGTG GTGATCGACG CCACCGCCAA TCTGCAAGCC
GGCGACCAGG TGATCGCACA GTGGCAAGGG CCCAACGGCA ATGACACCCG GGAAAAGACC
CTGACCGGCG CAGACGCGGG CAAGACGCTG GAGGTAGTGT TTGCTGCGGC GCTGGTGACG
GCAAACGCCG GGCAGACGGT GGCGATTTCC TATGTCGTCA ATCGCGTCAA CGGTCTGGTG
CAGGTATCCG GCACGCTGGC CTTGCAGATT CTGGCGGCGC AGCCCGCGCT GGTGCTGGAC
ACTTCGCCGG TCACGCTGGC TGGCAAGGTG TATCTGCTTC CGGGCTCGCC GGACCTGCTG
CCGAACTTCC CGGCCGACAC CACCGTTCAG CGTCAGGCCA GTGGCGGACA GGCCCCCTAT
CAGTACACCT CGAGCGACCC GCTGGTCGCG AAAGTGGACA GCAACGGCCT GACCTCGGTT
CGAAGCAAAG GCACGGCCAT CATTACTGCG ACCGATGCGC TGGGCGCGAG CAAGCAGTAC
ACGGTCACCG TCACCGGCGT CATCCATTGC ATCGGCCTGG GCAGCGGCAG CTTTTCTCAG
ATCAGCAAAA ACGCGGGCAA CAACGGCGCG AGGATTCCAA CCATTCACGA GCTGGTGGAT
ATCCACGCCC TGTATGGCAA TCGCTGGCCG ATGGGCAACG GCAACTATTG GTCGTCGACT
GTCTCAAGCG CCGGCATCGG CGGATGGAAC TGGTATTACG TGAAAAACAT GGTCACTGGC
GGCAACTTCA AACTGAAGAG CCACAACTCC AGCCTTGGCG TAGGCATCAG ATGA
|
|---|
| Protein sequence | MNSLQTSPAL PVPLPLSYNP QGIGDVDVAD PAKPIEILIG PINLKPKDRI DLFWGTHNEV
IDTYTHSSDS PNTNGFFSLY VDTRWVQSGL TDVNYLYTPF PSNIQEHSPV NKIVVKLEIP
GGRDPDPATP YENEKLDIPT VNPSGVITSP EGVSVTLDAY ENMAAGDSIF IYWHGIRVEH
PPLTADQLGK PVTVSIDKQI IIEAGDSENI VVRYDVRDIV NNWSRFSFPA YVAVEAGNSS
LQAPIAPQAP NMELDLDKLA GADVQALVLS HASIATGDII NFVMERNTAE GIQLESFTAS
KVVQIPGSFV EFLIPNEQFH PIAQGRARLK YTVIKGTGEA LRSKSLTLAV LGQPQQLSLP
HVQGVTNGIL NPDSHNVITQ VPPYYFMADG HDINLVWIGK AANGETVMHQ EVKNLNADDI
GKGIEYLIPD EKVSALAGGS LEVYYTVTTY ARAFFKSPIL RLLVDVDNSS PLEAPAVDKL
SADGILDPAD IPLEAIVRVL PYRAMAEGDK VTIHWEGGDA GGTYSTYTVI NTGTVNRETV
FRIPKRYIDA NLNGLVQVWY TAQHGDRIAE SQRLAITIRE SVALPLPTPT LKEATGTTLD
PANASSGATV VIDATANLQA GDQVIAQWQG PNGNDTREKT LTGADAGKTL EVVFAAALVT
ANAGQTVAIS YVVNRVNGLV QVSGTLALQI LAAQPALVLD TSPVTLAGKV YLLPGSPDLL
PNFPADTTVQ RQASGGQAPY QYTSSDPLVA KVDSNGLTSV RSKGTAIITA TDALGASKQY
TVTVTGVIHC IGLGSGSFSQ ISKNAGNNGA RIPTIHELVD IHALYGNRWP MGNGNYWSST
VSSAGIGGWN WYYVKNMVTG GNFKLKSHNS SLGVGIR
|
|---|
| |