Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3393 |
Symbol | |
ID | 3368920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4050761 |
End bp | 4051408 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653744 |
Product | cytochrome c biogenesis protein CcmA |
Protein accession | YP_236463 |
Protein GI | 66046622 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCAG CCACCCCATT TTTGCAAGCG ACGGCTCTGG CGTGTGAGCG GGACGGGCGG ATGCTGTTCG AAAACCTCGA TCTTCACCTG CACACAGGCG ACATGCTGCA GATCAGCGGT CCCAACGGCT GCGGCAAGAC CAGCCTGCTG CGCCTGCTGT GCGGGCTGAT GCAGCCAACG GCCGGGCAAA TCCTGCTCGA CGCGCAGCCA CTGGGCCGGC AGCCCGCCGC ACCGGGCCGC AAACCGTTGT GGATCGGTCA TGCGCCAGCG ATCAAGGATG TGCTGACGCC ACTGGAAAAC CTGTCCTGGC TCAGTGCACT TCACCAGCCG GACGGTGCCG ATGCCGATAC CATTGCCACC GCGCTCGATG CGGTCGGGCT GGCAGGTTTC GAGGATGTGC CCTGTCACAC CTTGTCGGCC GGGCAGCAGC GTCGCGTCGC GCTGGCACGT CTGTATCTGC CGGGCCCGCC ACTCTGGCTG CTCGACGAGC CGTTTACCGC GCTCGACCGC CAAGGCATCG AGCAACTGGA GAAACACCTC GCCGAGCACT GTGAACACGG CGGCATGATT GTCATGACCA CTCACCACAG CCTGAACCGC CTGCCTGCGG GCTATCGGGA CCTCGACCTG GGGCAATGGT CAGCATGA
|
Protein sequence | MIPATPFLQA TALACERDGR MLFENLDLHL HTGDMLQISG PNGCGKTSLL RLLCGLMQPT AGQILLDAQP LGRQPAAPGR KPLWIGHAPA IKDVLTPLEN LSWLSALHQP DGADADTIAT ALDAVGLAGF EDVPCHTLSA GQQRRVALAR LYLPGPPLWL LDEPFTALDR QGIEQLEKHL AEHCEHGGMI VMTTHHSLNR LPAGYRDLDL GQWSA
|
| |