Gene Psyr_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3389 
Symbol 
ID3368916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4048598 
End bp4049065 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID637653740 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_236459 
Protein GI66046618 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGC TACGCAAAAA ACGCTTGTTG ATCATTGTCG CGCTGCTGGC CGGTGTTGGT 
CTGGCCGTGA CCCTGGCTCT CAGCGCCTTG CAGGAAAACA TCAACCTGTT CTACACCCCC
AGCCAGATCG CCAATGGCGA GGCGCCACTG GATACCCGCA TTCGGGCCGG CGGCATGGTC
GAAAAGGGCT CATTGCAGCG CTCGGCCGAT TCGCTGGACG TGCGTTTTGT GGTCACCGAT
TTCAACAAGT CGGTAACCAT CACCTATCGA GGCATTCTTC CCGATCTGTT TCGCGAAGGG
CAGGGCATCG TGGCGCTGGG CAAACTCAAT GCACAGGGCG TAGTGGTGGC CGACGAGGTA
CTGGCCAAGC ATGACGAGAA GTACATGCCC CCCGAGGTCA CCAAGGCCCT GCGTGACAGC
GGTCGGGCGG CACCGGCTGC GTCTCCCACA CCCGTCAAAC AGGGTTGA
 
Protein sequence
MNPLRKKRLL IIVALLAGVG LAVTLALSAL QENINLFYTP SQIANGEAPL DTRIRAGGMV 
EKGSLQRSAD SLDVRFVVTD FNKSVTITYR GILPDLFREG QGIVALGKLN AQGVVVADEV
LAKHDEKYMP PEVTKALRDS GRAAPAASPT PVKQG