| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3388 |
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| Symbol | |
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| ID | 3368915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4046621 |
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| End bp | 4048594 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653739 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_236458 |
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| Protein GI | 66046617 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0609216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG AACTCGGCCA TCTGGCCATG ATTATGGCAC TCGGCTTTGC GCTGGTGCAG
GCCATCATTC CGCTGATCGG CGCGTGGCGC GGTGACCGCT TGTGGATGAG CCTGGCCCGT
CCGGCAGCCT GGGGCCAGTT CAGCTTTCTG ATCTTCGCCT TCGGTTGCCT GACCTACGCG
TTCATGGTCG ACGACTTCTC TGTCGCCTAC GTTGCACAGA ACTCCAACAC CGCGCTGCCC
TGGTACTACA AGTTCAGCGC CGTGTGGGGC GCGCATGAAG GTTCGTTGCT GCTTTGGGCA
TTGATTCTCG GTGGCTGGAC CTTCGCCGTG TCGGTGTTTT CCCGGCAACT GCCGCAGGTG
ATGCTGGCGC GGGTCCTCGC CGTGATGGGC ATGATCAGCC TGGGTTTCCT GTCGTTTCTG
ATCCTCACCT CAAATCCGTT CGCGCGTCTG TTGCCGCAGA TGCCCGCGAA TGGACGTGAT
CTGAACCCGT TGTTGCAGGA TATTGGCCTT ATCGTGCATC CGCCGATGCT GTACATGGGC
TATGTCGGCT TCTCCGTGGC GTTTGCATTC GCCATCGCCG CCTTGCTCGG CGGTCGACTC
GACGCTGCCT GGGCGCGCTG GTCCAGGCCG TGGACGCTGG TGGCCTGGGC CTTTCTCGGC
ATCGGCATCA GCCTGGGCTC ATGGTGGGCG TATTACGAGC TGGGCTGGGG CGGCTGGTGG
TTCTGGGACC CGGTGGAAAA CGCCTCGTTC ATGCCTTGGC TGGTCGGCAC TGCGCTGATT
CACTCGCTGG CGGTCACGGA AAAACGTGGC GTGTTCAAGA GCTGGACGGT ATTGCTGGCC
ATTGCTGCGT TTTCACTGAG CCTGCTGGGC ACGTTCCTGG TCCGTTCCGG GGTGCTGACC
TCCGTGCACG CCTTTGCCTC GGACCCGGCG CGCGGCGTGT TCATCCTGAT GTTCCTGCTG
GTCGTGGTGG GTGGCTCGCT GACCCTGTTC GCGATTCGCG CACCGGTGGT CAAAAGCCAG
GTCGGATTCG GCCTGTGGTC GCGGGAAACC CTGCTGCTGG GCAATAACCT GTTGCTGGTG
GTTGCCGCGT CCATGATTCT GCTGGGCACC CTTTATCCGC TGGTGATCGA TGCCATGAGC
GGCGCCAAGA TGTCGGTCGG GCCGCCGTAC TTCAATACAC TGTTCGTGCC ATTGATGGGC
TTGCTGCTGG TGGTGATGGC GGTCGGCGTA CTGGTGCGCT GGAAGGACAC GCCGTTGAAA
TGGCTGCTCG GCATGCTGGC CCCGGTACTG GTCGGCAGCG TCGTCCTGGC GGTGCTGGCC
GGTCTGCTGC TGGGCGATTT CCAGTGGGCG GTGCTGGCGA CCCTGATGCT CGCCGCCTGG
GTGCTGCTGG CCGGGGTTCG CGACCTGCTC GACAAGACTC GCCACAAGGG GCTGATCAGC
GGCGCACGCA GTCTGACCCG CAGCTACTGG GGCATGCAGC TGGCGCACCT TGGCATTGTC
GTGTGCGCGC TGGGTGTGGT GCTGTCGAGC CAGAACAGCG CCGAGCGCGA TTTGCGCATG
GCCCCCGGCG AGTCCACCGA ACTGGGTGGG TATACCTTTG CCTTCGAGGG CGCTCGGCAT
TATGAAGGGC CGAACTTCAC CTCGGATCGG GGCACCGTTC GCGTGCTGCG CAATGGCGTT
CAACTGACCG AACTGCACCC GGAGAAGCGC TTCTACACCG TGCAGCAGTC GATGATGACC
GAAGCGGGCA TTGATGCCGG TTTCAGCCGT GACCTGTATG TCGCCTTGGG TGAACCGCTG
GGCGATGGCG CGTGGGCCGT TCGGGTTCAT GTCAAACCGT TTGTGCGCTG GATCTGGCTT
GGCGGCCTGC TGACCGGTCT GGGCGGGGTG CTGGCGGCGC TGGACCGGCG TTATCGCACC
CGGGTGAAGA ACAAGGTGCG CGAGGCGTTG GGTATGTCGG GAGCTGCACA ATGA
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| Protein sequence | MIPELGHLAM IMALGFALVQ AIIPLIGAWR GDRLWMSLAR PAAWGQFSFL IFAFGCLTYA
FMVDDFSVAY VAQNSNTALP WYYKFSAVWG AHEGSLLLWA LILGGWTFAV SVFSRQLPQV
MLARVLAVMG MISLGFLSFL ILTSNPFARL LPQMPANGRD LNPLLQDIGL IVHPPMLYMG
YVGFSVAFAF AIAALLGGRL DAAWARWSRP WTLVAWAFLG IGISLGSWWA YYELGWGGWW
FWDPVENASF MPWLVGTALI HSLAVTEKRG VFKSWTVLLA IAAFSLSLLG TFLVRSGVLT
SVHAFASDPA RGVFILMFLL VVVGGSLTLF AIRAPVVKSQ VGFGLWSRET LLLGNNLLLV
VAASMILLGT LYPLVIDAMS GAKMSVGPPY FNTLFVPLMG LLLVVMAVGV LVRWKDTPLK
WLLGMLAPVL VGSVVLAVLA GLLLGDFQWA VLATLMLAAW VLLAGVRDLL DKTRHKGLIS
GARSLTRSYW GMQLAHLGIV VCALGVVLSS QNSAERDLRM APGESTELGG YTFAFEGARH
YEGPNFTSDR GTVRVLRNGV QLTELHPEKR FYTVQQSMMT EAGIDAGFSR DLYVALGEPL
GDGAWAVRVH VKPFVRWIWL GGLLTGLGGV LAALDRRYRT RVKNKVREAL GMSGAAQ
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