| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3355 |
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| Symbol | |
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| ID | 3368882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4012518 |
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| End bp | 4014458 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653706 |
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| Product | PAS |
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| Protein accession | YP_236425 |
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| Protein GI | 66046584 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.996652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.102892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAG GCTTTTGCAT CATTGAATTC CTTGACGGGC CGCACGGTCC GCTGAGCGAT
TACATTCACG TTGAAGCCAA CCCGGCCTAT GAGTACCACG CCGGCATTTC CAACGTGGTG
GGCAAGAAGC TGCGTGAGAT GGTTCGCGAG GAGGCCGATG GCTGGGTGGA GTTTTACGGC
GACGTGTTGC GGACCGGCAA GCCGATCCGT TTTGAACGCG AACTGGTGGC CACCGGGCGC
TATCTGGCCT TGACCGCGTT TCGCATCGAG CCGGCCAGCC GTCGGCAGGT CGCTGTACTG
TTTCAAGACA TCACTGAACG CAAGCGCGCT GAACTGGAGC TCAAGCAGCT GAACGAGACA
CTGGAGGCGC GCATTGTCGA AGCAGTGGCC GAGCGCAATG TGCTGGCCGA TGTCGTCAAC
GGCACCAATG CGATCATTCA TGTCGTCGAC TGCAATTTTC GCTGGATGGC CATCAATGGC
GCGGCACTGC GCGAGTTCGA GCGCCTGTTC GGCATCCGGC CGCAAGTGGG TGACAGTATG
CTCGACCTGC TCGACGACCG TCCGCAGAGC AAGGCTGATC TTGAAAGGCG CTGGACGCGC
GCATTAGCGG GCGAAGAGTT CGCCGAAAGC GTCAGCTTCA GCGACTCGAA CGATCCGGCC
AGCCATTTTG AAATACGTTA CAGCACGCTG CGCAATGCTC AGGGGCAGGC CATTGGCGCT
TACCTGTTTG CCTACGATGT CAGCGAACGG CTGCGCGAGC AGGAGCGCCT GAGCCAGGCT
GAAGAAGCCT TGCGCCAGTC CCAGAAAATG GAAGCCGTAG GCCAGTTGAC TGGCGGTATC
GCCCACGACT TCAACAACCT GTTGACCGGC ATCACGGGCT CGCTGGAACT GCTCAAGACA
CGGGTGAGCC AGGGCCGTTT CAATGAACTG GATCGCTACC TAGGGGCTGC GCAGGATGCC
TCCAAACGTG CGGCGTCACT GACTCATCGA TTGCTGGCGT TTTCGCGCCG GCAAACCCTG
GACCCCAAAC CGGTCGACAT CAACCGGCTG GTGATCGGCA TGGAAGAGCT GATTCGGCGC
ACGGTCGGGC CGCACATCAC TCTGGAAGTC GTGACCTCGG TCGGGTTGTG GTCAACCTTC
ATCGACGCGC CGCAACTGGA AAATGCCTTG TTGAACCTGT GCATCAACGC CAGGGACGCC
ATGCCGCGAG GCGGGCGGAT CACCATTGAG ACGGCCAACC GATGGATTGA CGAGCGCGGT
TCGCAAGGCC GCGACCTGAT CCCCGGGCAG TACCTGTCGC TGTGTGTCAG CGACACCGGT
ACAGGCATGT CGCCCGAGGT CATCAATCGG GTATTCGACC CTTTCTTCAC CACCAAGCCA
CTGGGGCAGG GTACGGGGCT GGGCTTATCG ATGGTGTACG GTTTCGTGCG CCAGTCCGGC
GGGCAGGTGC GCATCTATTC CGAGCCTGGT CAGGGCACGA ACATGTGCCT GTACCTGCCG
CGTCATTACC TCGGGGCGCC AGAAGAGATC GAGGCGGCAG ATGCCTGTGG ATCGGCGCCT
GCACAGACCG AGCGCACGGT AATGATTGTT GACGATGAGC CGACCATCCG CATGCTGGTG
GCTGAAGTGC TGGAGGATCA GGGCTACATT CCGATCGAGG CGGGCGAAGG TGCATCCGCG
CTCAAGGTGC TGGAGTCCGA TGCGCGTATC GACCTGCTGG TGACTGACGT CGGGTTGCCG
GGTGGCATGA ATGGCCGGCA ATTGGCCGAT GCTGCGCGCA TCATTCGACC CGACCTCAAA
GTGCTGTTCA TCACCGGGTA CGCAGAGAAC GCCATCATTG GCAACGGCCA TCTGGATCCG
GGCATGTGGG TGCTCACCAA ACCCTTCACC ATGGAAGCGT TTGCCAGCCG CATCTACGAA
ATGATCGAGC GCGAAGACTG A
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| Protein sequence | MDEGFCIIEF LDGPHGPLSD YIHVEANPAY EYHAGISNVV GKKLREMVRE EADGWVEFYG
DVLRTGKPIR FERELVATGR YLALTAFRIE PASRRQVAVL FQDITERKRA ELELKQLNET
LEARIVEAVA ERNVLADVVN GTNAIIHVVD CNFRWMAING AALREFERLF GIRPQVGDSM
LDLLDDRPQS KADLERRWTR ALAGEEFAES VSFSDSNDPA SHFEIRYSTL RNAQGQAIGA
YLFAYDVSER LREQERLSQA EEALRQSQKM EAVGQLTGGI AHDFNNLLTG ITGSLELLKT
RVSQGRFNEL DRYLGAAQDA SKRAASLTHR LLAFSRRQTL DPKPVDINRL VIGMEELIRR
TVGPHITLEV VTSVGLWSTF IDAPQLENAL LNLCINARDA MPRGGRITIE TANRWIDERG
SQGRDLIPGQ YLSLCVSDTG TGMSPEVINR VFDPFFTTKP LGQGTGLGLS MVYGFVRQSG
GQVRIYSEPG QGTNMCLYLP RHYLGAPEEI EAADACGSAP AQTERTVMIV DDEPTIRMLV
AEVLEDQGYI PIEAGEGASA LKVLESDARI DLLVTDVGLP GGMNGRQLAD AARIIRPDLK
VLFITGYAEN AIIGNGHLDP GMWVLTKPFT MEAFASRIYE MIERED
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