| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3348 |
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| Symbol | |
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| ID | 3368875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4003979 |
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| End bp | 4005607 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653699 |
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| Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
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| Protein accession | YP_236418 |
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| Protein GI | 66046577 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.946905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.024921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGC GAAAACTCAA CCTGGCCGCG CGCTCGACGC TTTGTTTCGG CGTGTTCTGC
CTGATGATCA TTGCCTTGGG CTTGCTTGCC CTGCGTCAGG CAGCCGAGCT CAATGCGGCG
GAAAAATTCA TCGAGACCAA TGTGCTTCCG AGCGTGAAAC AGCTCGCATC GATCGATCGG
GAGTTTGTCA GTATCCGCGG CAACAACGCC CGTGTGCGCA ATCCGATTGA GCCGCAGGAT
CGAAAGACCA AGGCGCTCAG CGATATCCAG CAGTCGCGCT CGCTGATCGC CGGCTATTTT
GACACGCTCG GCAAATTGAT CGTGACTCCG CAAGGGCGCC AGGCCTTCGA CGAATTGTCC
CAGGCACAGG CCGGGTATCA GGTGGCACAG GATCGCTACC TCGCCTCGGT AGCCGCCGGC
AATCTGGAAG CTGCAGTGGC AACTTCCAAT GGCGAAATGA AAAGCGCGGC CGATCAGGTT
GAAACCGGGC TGAAGAAACT CATTGGCGTC AACGACGCCA AAGCCGAGAA AGCCGGCGCT
GCCGCTAACG CTGCCTATCA GCAGACGCTG TGGATGGTGG GCATTTTCAT CACCGTAGGC
GTCATCACCA CGCTGCTCCT CGCCTGGATG TACACCCGCA GTCTAACTGG CCCGATTGGC
GATTCGTTGA GTATCGCGCA ACGCATTGCC ACCAATGATC TGAGCCAGGA CATCCCGCAA
CATGGCACTG ACGAGGCGGC GAAACTGATT GCCGCACTCG CCACCATGCA GTCCAACCTG
CGCAATGCCC TGACCCTGAT CGGCGACTCC TCCACCCAGC TGGCTGCGAC TTCCGAGGAA
ATGCATGCCG TCACCGAAGA CGCCTCGCGC ACCATTCTGC GCCAGACCAA CGAGATCGAA
ATGGCAGCCA CCGCCGTCAA CGAGATGAGC GCGGCAGTAG AGGAAGTGGC CAGTAACGCC
GCATCGGCAT CTGAGGTGAC CTCGCAATCC AGCACTGCAG CCATGGCTGG GCGCGCGCAG
GTCGATGAGA CCGTCACGGC GATCAACCTG ATGGTCTCCA AGGTGCAGAT CACCTCCACT
GAGGTACAAG GCCTGGCCGT CATGGCGACG GATATCAGTA AGGTGCTGGA TGTGATCCGT
GCCATCGCGG AACAGACCAA CCTGCTGGCA CTCAACGCAG CCATCGAAGC GGCTCGTGCA
GGTGAAGCCG GGCGGGGTTT TGCGGTGGTG GCGGACGAGG TCAGGGCGCT GGCGCATCGC
ACCCAGCAAT CAACCCGTGA AATCGAACAG ATGGTCGACT CGATCCAGAC CGGCACCGGC
AATGCTGTCA GCGCAATGGA GCAGACCAGC GTTCAGGCCC ACAAGACACT GGAGATGGCC
AATGGCGCTG GCAAGGCGCT GCTGGAAATC ACCGAATCCA TCAGCCAGAT CAATGAACGC
AACCTGATGA TCGCCACCGC CGCCGAAGAA CAGGCTCAGG TCGCTCGAGA AGTCGACAGG
AGCCTGGTCA GCATTCGTGA TCTGTCCAGC CAGACATCCG AGGGCTCCAA TCAGACGGCC
ATCGCCACTG CCGAACTGTC GACCCTGGCT TCAAGCCTGA ACCGTCTCAC CAAGCAATTC
CGCGTTTAA
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| Protein sequence | MILRKLNLAA RSTLCFGVFC LMIIALGLLA LRQAAELNAA EKFIETNVLP SVKQLASIDR
EFVSIRGNNA RVRNPIEPQD RKTKALSDIQ QSRSLIAGYF DTLGKLIVTP QGRQAFDELS
QAQAGYQVAQ DRYLASVAAG NLEAAVATSN GEMKSAADQV ETGLKKLIGV NDAKAEKAGA
AANAAYQQTL WMVGIFITVG VITTLLLAWM YTRSLTGPIG DSLSIAQRIA TNDLSQDIPQ
HGTDEAAKLI AALATMQSNL RNALTLIGDS STQLAATSEE MHAVTEDASR TILRQTNEIE
MAATAVNEMS AAVEEVASNA ASASEVTSQS STAAMAGRAQ VDETVTAINL MVSKVQITST
EVQGLAVMAT DISKVLDVIR AIAEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRALAHR
TQQSTREIEQ MVDSIQTGTG NAVSAMEQTS VQAHKTLEMA NGAGKALLEI TESISQINER
NLMIATAAEE QAQVAREVDR SLVSIRDLSS QTSEGSNQTA IATAELSTLA SSLNRLTKQF
RV
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