Gene Psyr_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3347 
Symbol 
ID3368874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4003229 
End bp4003846 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID637653698 
Productregulatory protein, TetR 
Protein accessionYP_236417 
Protein GI66046576 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.235212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0210246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCC GTACTGAAGC TCGCCGCGAA GCCATCATTG ATGCCGCAGC AAGTGTCTTC 
CTCGAAATGG GCTACGAGCG TGCCTCGATG AATGAAGTCA CCAAACGAAT GGGTGGCTCC
AAGGCAACGA TCTATAGTTA CTTTCCCTCC AAGGAAGAAC TGTTCATCGC TGTGGTCAAC
AGGCTTGCAA CTGCCCATCT GGCCGACGCG GTTTCAGAGC TGGCGATCCA GGATGACAAA
CCGATCGATT TGCGGGCCCT GTTCACGCGC TTCGGGGAAC GCATGCTGAT GGTGCTTATC
AATGATGACA AGGCATTGGC CGTGTATCGC ATGGTAGTGG CCGAGTCCGG GCACTCGGAC
ATCGGCATGA TGTTCTACGA GTCCGGCCCC AGCCAGTGCC TGCAGACAGT TACCTCGCTC
ATGACTCTGG CGATGCGAAA AGGCCAGTTG CGTGAAACCG ATCCGCACAT CGCCTCGTTG
CAGCTGACCT CGCTGTTGAC TGCCGAGACC GACATTCGCC TTTACCAACA GGCGCCCATG
CCGCTGAGCA TCGAAGAAAT TCGCGCCATG GTCGAACGCG CAGTGGATAC CTTCATGTTG
GGTATGGAGA AACGTTGA
 
Protein sequence
MKVRTEARRE AIIDAAASVF LEMGYERASM NEVTKRMGGS KATIYSYFPS KEELFIAVVN 
RLATAHLADA VSELAIQDDK PIDLRALFTR FGERMLMVLI NDDKALAVYR MVVAESGHSD
IGMMFYESGP SQCLQTVTSL MTLAMRKGQL RETDPHIASL QLTSLLTAET DIRLYQQAPM
PLSIEEIRAM VERAVDTFML GMEKR