Gene Psyr_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3310 
Symbol 
ID3368837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3961818 
End bp3962639 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content61% 
IMG OID637653661 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_236380 
Protein GI66046539 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.342326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.394001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC GCATGATGCA TTCTCATAAT CTCAGAGAGG CACTGCCCGA TTACGCGCGC 
AAGATGGCGG TGCCGCTCGA CGAGCTGGAA GCCGCCTACC AGTGGATGCT GGACAACGAA
GTGTGCTTTG AAACACGTAT CAAGGATCGC ACCCTGTCGT TCATCTGCTA CCTCAATATC
GAGCCCAGAA TCGAACACCC GCTGGCGCGA CGCTTCTACA AGCTGCTGGC CATCGAAACC
AAAGGCGCGC TTATCCCGCT GTACGGGATC AACTGGCCGA CCCTGCGCGA CCGCATGTTG
CGGACTTGGG AGCAGGCTTA CAACATCCTG ATCTGCAAGA TCCCCAGCCA CACCCTGCGC
CTGCTGTGGT TGCGCATCGG CGGCGCGAAG ATCGGCAAGG GCTCGACGGT CTGGCGCAAC
ACCGAGGTGC TCGGCGTCGA CAGCCTGCGC ATCGGCAATG ACAGCACGGT GGGCTGGCAT
TGCCAGCTTG ACGCGCGCGG CGGGCTGGTG ATCGGCGATC ACGTCACCAT CGCTTCGCAT
GTGCTGATCA TCGCCGGCGG CCACGATCTC AACGAACCCG AATTCTGGGC AGTAGGCGGG
CCGGTGTTCA TCGGCGACTA CGCCTGGATC TGCAGCCGTG CGCTGCTTTC GTTTGGTGCC
GACATCGGCG AGGGCGCAGT GGTGGGCGGT AACAGCGTGG TCTCCAAACC GGTTCCGCCC
TATGCCATCG TCAGTGGCCC GAATGCGGAA ATCAAGGGCG AGCGTGCTCG CGGCCTCAAC
TACAAGGTGG GCGGCAAAGG CCTGTTCACC TTGTTTCACT GA
 
Protein sequence
MKHRMMHSHN LREALPDYAR KMAVPLDELE AAYQWMLDNE VCFETRIKDR TLSFICYLNI 
EPRIEHPLAR RFYKLLAIET KGALIPLYGI NWPTLRDRML RTWEQAYNIL ICKIPSHTLR
LLWLRIGGAK IGKGSTVWRN TEVLGVDSLR IGNDSTVGWH CQLDARGGLV IGDHVTIASH
VLIIAGGHDL NEPEFWAVGG PVFIGDYAWI CSRALLSFGA DIGEGAVVGG NSVVSKPVPP
YAIVSGPNAE IKGERARGLN YKVGGKGLFT LFH