Gene Psyr_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3303 
Symbol 
ID3368830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3952813 
End bp3953592 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID637653654 
Productpolysaccharide export protein 
Protein accessionYP_236373 
Protein GI66046532 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0200741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA TGATGCTGAT CGCCAGCTTA TTGCTGTTGA GTGCGTGCAA TACCCCTTCC 
AGGGTGGGCC TGCCCGATGA CCGTGCGCAA ATCGAGGCCG GCCAGGCTGC GGGCCGCGCA
CTGGCTGGCA AGCCGCTGCC GCCGGAGCGA ATCCGCCCCG GCGATACGCT GCGCATCGTG
CGCAACAGTG GCGAGGCGCC GTCGATTTCG GCGTTTACCG CCAACTCCAT CTATGAACTG
ACCCTGTTTC AGGTGCTCAA CGACGGCACC TTTTCCTACC CTTATATCGG CACCGTCAAG
GCTGCGGGCC TGACCCTCCA ACAGTTGAAC GACCTGCTGG AAAGCAAACT GCAGAGCGTC
TACCGCGAGA CCGCGCTGAC CATCAACATC TCCCAGTCAC CGGGCAACAC GGTGTTTGTC
GGTGGCGCGG TGCGCAACTC GGTCACCTTG CCGGTCAACG TCGCCACCAA CCTCGACCAG
GCGATTGTCG GCGCGGGCGG CGTGGCGCTC GATGCCGATG CCGGTCAGGT CGCGCTGCTG
CGTCAGGAAG AAAACGGGCT CTACAAGACC TACTTCTTCG ATTACAGCAA ATTCCTCTGG
GCAGGCGGCG CCGGTGGCCC TACCGCCCCG GTTCTGTTGA AACGCGGCGA TATCGTGTTC
GTTCCCAAAT CATCGGTCGG CAACAAGGTT GACGGCGTAT CCCTGTATTT CAACCAGTTG
ATCCCCTTCG CGAAGTCGAT CGGCCTGGGC CTGAACTACG AGCTGCGCAA CAACAATTAA
 
Protein sequence
MKSMMLIASL LLLSACNTPS RVGLPDDRAQ IEAGQAAGRA LAGKPLPPER IRPGDTLRIV 
RNSGEAPSIS AFTANSIYEL TLFQVLNDGT FSYPYIGTVK AAGLTLQQLN DLLESKLQSV
YRETALTINI SQSPGNTVFV GGAVRNSVTL PVNVATNLDQ AIVGAGGVAL DADAGQVALL
RQEENGLYKT YFFDYSKFLW AGGAGGPTAP VLLKRGDIVF VPKSSVGNKV DGVSLYFNQL
IPFAKSIGLG LNYELRNNN