Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3300 |
Symbol | |
ID | 3368827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3948347 |
End bp | 3949264 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653651 |
Product | lipid kinase |
Protein accession | YP_236370 |
Protein GI | 66046529 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.336089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAC GCAGGGCAAT GCTCATTCTT CACGGTAAAC AGGCGCTCAA TGAAGATGTA CGTGACGCGG TGGCAGACAA GCGCAAGCAG GGCTGGGAAC TGGACGTGCG ACTGACCTGG GAAGCTGGCG ATGCCCAGCG CCTGGTCAGC GAAGCCCTGG CGGCCGGCCA TCGGCACATC GTCGCAGGTG GTGGCGACGG CACCTTGCGC GATATCGCCG AAGCCCTGGC CCTGGCCGAA ACCAGTGCCA GCCTGACTAT TCTGCCGCTG GGGACTGCCA ACGATTTTGC CCGTGCGGCC GGCGTGCCGC TGGAGGTCTC CAAAGCCCTG CAACTGATGG ACGTGGCCCC GCGTGCCGTC GATCTGGGTG AGGTCGGTGG CAAGCTGTTC CTCAACATGG CGACCGGCGG GTTTGGCAGC CAGGTCACGG CGAACACGTC CGAGGACCTC AAGAAGGTGC TGGGGGGGGC CGCCTATCTG TTTACCGGCC TGACCCGATT CAGCGAGCTG CATTCGGCGC ATGGCGAGCT CACCGGACCG GATTTCCACT GGCGCGGCGA TCTGCTTGCC CTGGGTATCG GCAATGGTCG GCAGGCGGGC GGTGGACACG AGCTGTGCCC GACCGCACTG GCCGATGATG GTCTGCTCGA CATCAGTATC CTGCCAGCGC CTCAGGAAGT GGTCGGCACG CTGAGGAGCC TCCTGGAGGG CGGGCTGGGT ATCGATAATA TGTTCATTCG TGCGCGTTTG CCGTGGGTAG AACTCAAGTC CACCCAGGGT CTGGATATCA ATCTGGACGG TGAGCCGCTG TCGGGCGAGG ACCTGCGTTT CGAGGCCCGG CCAGGCGCGC TTCACGTGCA CCTGCCAGCG GACTCGCCGT TACTGGGCGG CGCCCCGAAG CTCAATCGTC CAGACTGA
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Protein sequence | MTQRRAMLIL HGKQALNEDV RDAVADKRKQ GWELDVRLTW EAGDAQRLVS EALAAGHRHI VAGGGDGTLR DIAEALALAE TSASLTILPL GTANDFARAA GVPLEVSKAL QLMDVAPRAV DLGEVGGKLF LNMATGGFGS QVTANTSEDL KKVLGGAAYL FTGLTRFSEL HSAHGELTGP DFHWRGDLLA LGIGNGRQAG GGHELCPTAL ADDGLLDISI LPAPQEVVGT LRSLLEGGLG IDNMFIRARL PWVELKSTQG LDINLDGEPL SGEDLRFEAR PGALHVHLPA DSPLLGGAPK LNRPD
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