Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3290 |
Symbol | fadB |
ID | 3368817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3936776 |
End bp | 3938941 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653641 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_236360 |
Protein GI | 66046519 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0906182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTACG AAGGTAAAGC CATCACGGTT AAGGCTCTTG AAAGTGGCAT CGTCGAATTG AATTTCGACC TCAAGGGTGA GTCCGTCAAC AAGTTCAACC GTCTCACCCT CAATGAGTTC CGCCAGGCAG TCGATGCGGT CAAGGCCGAC GCATCGGTCA AGGGCGTGAT TGTCACCAGT GGCAAAGATT CATTCATTGT CGGCGCCGAT ATCACCGAAT TCGTCGACAA CTTCAAGTTG CCGGAAGCTG AGCTGGTCGC CGGCAATCTG GAAGCGAACA GGATTTTCAG TGATTTCGAA GACCTGAACG TGCCGACTGT CGTGGCAATC AACGGTATCG CGCTGGGCGG CGGTCTGGAA ATGTGCCTGG CCGCAGACTA TCGAGTCATG GCCAGCAGCG CTCGTATCGG TCTGCCCGAG GTCAAGCTTG GCCTGTACCC GGGTTTCGGC GGCACAGTCC GTCTGCCACG CATTATCGGT GCCGACAACG CGATCGAGTG GATTGCCTCG GGCAAGGAAA ACGCCGCGGA AGACGCTTTG AAGGTCGGTG CCGTCGATGC CGTGGTAGCG CCTGAAAAAT TGCAGGCCGC CGCCCTTGAT CTGATCCAGC GCGCCATTTC CGGCGAGTTC GATTACAAGG CCAAGCGTCA GCCGAAGCTG GACAAGCTCA AGCTCAATGC CATCGAACAG ATGATGGCAT TCGAAACCGC CAAGGGCTTC GTTGCAGGTC AGGCCGGCCC GAACTATCCG GCCCCGGTCG AAGCCATCAA GACCATCCAG AAAGCCGCCA ACTTCGGTCG TGACAAGGCG CTGGAGATCG AAGCCGCCGG TTTCGTGAAA ATGGCCAAGA CCCCTGCTGC GCAGAGTCTG ATCGGCCTGT TCCTGAACGA TCAGGAGCTG AAAAAGAAAG CCAGGGGCTA CGACAAGATT GCCAAGGACG TGAAGCAGGC GGCCGTACTG GGCGCCGGGA TCATGGGCGG CGGCATTGCC TATCAGTCGG CAGTCAAAGG TACGCCGATC CTGATGAAGG ATATTCGCGA AGAAGCCATT CAACTGGGTC TGAACGAAGC GTCCAAACTG CTGGGTGGTC GCCTGGAGAA AGGTCGTCTG ACCGCGGCGA AGATGGCCGA AGCGCTTAAC GCCATTCGTC CTACGCTGTC CTACGGCGAT TTCGGCAATG TCGATCTGGT CGTCGAAGCT GTCGTCGAGA ACCCCAAGGT CAAGCAGGCG GTACTGGCCG AAGTCGAAGC CAACGTGGGT GAAAACACCA TTCTGGCGTC CAACACCTCG ACCATCTCGA TCAGCCTGCT GGCCCAGGCC CTCAAGCGCC CGGAAAACTT CGTCGGCATG CACTTCTTCA ACCCGGTACA CATGATGCCG CTGGTGGAAG TGATCCGTGG CGAGAAATCC AGTGAAGAAG CGGTCGCGAC GACCGTTGCC TACGCCAAGA AAATGGGCAA GAACCCGATC GTGGTCAATG ACTGCCCGGG CTTCCTGGTC AACCGTGTGC TGTTCCCGTA TTTCGGTGGT TTCGCCAGAC TGGTCAGTGC GGGCGTGGAT TTCGTGCGCA TCGACAAGGT CATGGAAAAA TTCGGCTGGC CGATGGGCCC TGCCTACCTG ATGGACGTGG TCGGTATCGA CACCGGCCAC CATGGTCGTG ATGTCATGGC CGAAGGTTTC CCTGATCGCA TGAAAGATGA TCGCCGCTCT GCGATCGATG CCCTGTACGA CGCCAAGCGC CTCGGGCAGA AGAACGGCAA GGGTTTCTAC GCCTACGAAA CGGACAAGAA GGGCAAGCCC AAAAAGGTCA ATGACCCGGC CGTGCTGGAC GTGCTCAAGC CGATTGTCTA CGAGCAGCGC GAAGTCAGCG ATGAAGACAT CGTCAACTGG ATGATGATCC CGCTGTGCCT GGAAACGGTC CGCTGCCTGG AAGACGGCAT TGTCGAAACC GCTGCCGAGG CTGACATGGG CCTGATCTAC GGTATCGGTT TCCCTCCGTT CCGTGGCGGC GCGCTGCGCT ACATCGATTC CATCGGTGTT GCCGAATTCG TTGCCCTGGC TGACCAATAC GCCGAACTGG GTGCCCTGTA TCAACCGACT GCGAAGCTGC GTGAGATGGC CGCCAACGGC CAGAGCTTCT TCGGTCAAGC GTCTTCCGAG GAATGA
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Protein sequence | MIYEGKAITV KALESGIVEL NFDLKGESVN KFNRLTLNEF RQAVDAVKAD ASVKGVIVTS GKDSFIVGAD ITEFVDNFKL PEAELVAGNL EANRIFSDFE DLNVPTVVAI NGIALGGGLE MCLAADYRVM ASSARIGLPE VKLGLYPGFG GTVRLPRIIG ADNAIEWIAS GKENAAEDAL KVGAVDAVVA PEKLQAAALD LIQRAISGEF DYKAKRQPKL DKLKLNAIEQ MMAFETAKGF VAGQAGPNYP APVEAIKTIQ KAANFGRDKA LEIEAAGFVK MAKTPAAQSL IGLFLNDQEL KKKARGYDKI AKDVKQAAVL GAGIMGGGIA YQSAVKGTPI LMKDIREEAI QLGLNEASKL LGGRLEKGRL TAAKMAEALN AIRPTLSYGD FGNVDLVVEA VVENPKVKQA VLAEVEANVG ENTILASNTS TISISLLAQA LKRPENFVGM HFFNPVHMMP LVEVIRGEKS SEEAVATTVA YAKKMGKNPI VVNDCPGFLV NRVLFPYFGG FARLVSAGVD FVRIDKVMEK FGWPMGPAYL MDVVGIDTGH HGRDVMAEGF PDRMKDDRRS AIDALYDAKR LGQKNGKGFY AYETDKKGKP KKVNDPAVLD VLKPIVYEQR EVSDEDIVNW MMIPLCLETV RCLEDGIVET AAEADMGLIY GIGFPPFRGG ALRYIDSIGV AEFVALADQY AELGALYQPT AKLREMAANG QSFFGQASSE E
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