Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3273 |
Symbol | |
ID | 3368800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3919748 |
End bp | 3920653 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653624 |
Product | AP endonuclease |
Protein accession | YP_236343 |
Protein GI | 66046502 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0853475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTTT CGACTTCCAC ACCCAGAATC CGCATCGGCA TCAATCCGAT CTCCTGGAGC AACGATGATT TGCCGGCCCT TGGCGGAGAA ACCCCGTTGA GCACGGCGCT CAGCGAAGGC AAAGCCATTG GTTACGAGGG CTTCGAGCTC AACGGCAAGT TTCCGAAAGA TGCCAAGGGT GTCGGCGATG TATTGCGGCC CCATGATCTG GCGTTGGTGT CCGGCTGGTA CTCCAGCCGT CTGGCGCGGC GTTCGGTGGC CGAGGAAATC GAAGCCATCA CCCCACATGT GCAGCTGCTC GCCGAAAATG GCGCTTCGGT GCTGGTGTAT GGCGAAGTGG CCGACTCGAT TCAGGGGCAG CGTATCCCGC TGGTCGAACG ACCGCGTTTT CACACCGATG CCGCCTGGCA TGAGTACGCC GAAAAACTCA CCGAGCTGGC ACGTTTTACC CTGTCCCGCG GCGTGCGTCT GGCGTATCAC CACCACATGG GCGCTTATGT CGAGTCGCCG CAGGATATCG ACCGGCTGAT GGCACTGACC GGTGAGGAAG TCGGCCTGCT GTTCGATTCC GGGCATTGCT ACATGGGCGG TGGCGAACCT CTTCAGGTGT TGAGCAAGCA CATCCAGCGT ATCTGTCATG TGCATTTCAA GGACGTGCGC AAGCCGGTGG TGCAACTGGC GCGCAACAAT CTGTGGAGCT TTCCCGACTG CATCATCAAC GGCACCTTCA CGGTGCCGGG CGATGGCGAC ATCGACTTCT CGGCGCTGCT CAAGGTGTTG CTGCAGGCCG ATTACCGCGG CTGGCTGGTG GTCGAGGCCG AACAGGACCC AGCGGTAGCG CCGAGCTATG TGTACGCCAA AAAGGGCTAT GACACGTTGC GCCAACTGCT GGCCGATGCA CGCTAA
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Protein sequence | MPVSTSTPRI RIGINPISWS NDDLPALGGE TPLSTALSEG KAIGYEGFEL NGKFPKDAKG VGDVLRPHDL ALVSGWYSSR LARRSVAEEI EAITPHVQLL AENGASVLVY GEVADSIQGQ RIPLVERPRF HTDAAWHEYA EKLTELARFT LSRGVRLAYH HHMGAYVESP QDIDRLMALT GEEVGLLFDS GHCYMGGGEP LQVLSKHIQR ICHVHFKDVR KPVVQLARNN LWSFPDCIIN GTFTVPGDGD IDFSALLKVL LQADYRGWLV VEAEQDPAVA PSYVYAKKGY DTLRQLLADA R
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