Gene Psyr_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3217 
Symbol 
ID3368744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3853334 
End bp3854221 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content59% 
IMG OID637653568 
Producthypothetical protein 
Protein accessionYP_236287 
Protein GI66046446 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00240946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.367781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA AATCCCGCAA CATAGCCTCT GCCCTGTTCC CTCTGGGACT GCTGATGATC 
GCCATGGTCT CCATTCAAAG CGGCGCGTCG CTGGCAAAGA GTCTTTTCCC TGTCGTGGGC
GCGCAAGGCA CCACAACACT CAGGCTGGTA TTCGCCAGCC TTATCCTGGT TGCCGTCCTG
CGCCCGTGGC GGGCGAATCT GACTGCAAAG TCGTTACGCA CTGTGGTGAT CTACGGCGTT
GCGCTGGGCT GCATGAACCT TCTCTTCTAT ATGTCGTTGC AGACAGTACC CCTGGGAATT
GCAGTAGCCC TTGAGTTCAC CGGTCCGCTG GCGGTGGCTT TGCTGTCCTC CCGCAAGCCC
ATCGATTTTC TCTGGGTGAC TCTGGCAGTC ATTGGCTTGC TGCTGTTGAT CCCTCTGGGG
ACCTCATCTG CCGCAATTGA TCTGCTCGGT GCCGGCTACG CCTTGGGCGC CGGTGTGTGC
TGGGCCGCGT ACATCGTGTT CGGTCACAAG GCCGGCGCCG ACAACGGTGT GCAGACAGCA
GCGCTCGGCG TCGTGATTGC CGCGCTCTTT ATAGGGCCGA TAGGCGTGAT ACACGCAGGC
TCTGCGTTAC TGGATATTTC ACTGATACCC GCAGCATTGG GTGTCGCCAT CCTCTCGACT
GCCCTGCCCT ATAGCCTGGA GATGATTGCC CTGACGCGCA TGTCGGCGCG TACATTTGGC
ACACTGGCAA GCCTGGAACC CGTCTTCGCT GCGCTTTCAG GCCTGATGTT TCTTCATGAA
AGCCTTTCAC TGACTCAATG GCTGGCGATC GGCGCAATCA TCTTCGCGTC CATCGGTGCA
ACCCTTGGCT CGGCAAACAG CAAACCTCAA CTGGTGCCGG CCGACTGA
 
Protein sequence
MSEKSRNIAS ALFPLGLLMI AMVSIQSGAS LAKSLFPVVG AQGTTTLRLV FASLILVAVL 
RPWRANLTAK SLRTVVIYGV ALGCMNLLFY MSLQTVPLGI AVALEFTGPL AVALLSSRKP
IDFLWVTLAV IGLLLLIPLG TSSAAIDLLG AGYALGAGVC WAAYIVFGHK AGADNGVQTA
ALGVVIAALF IGPIGVIHAG SALLDISLIP AALGVAILST ALPYSLEMIA LTRMSARTFG
TLASLEPVFA ALSGLMFLHE SLSLTQWLAI GAIIFASIGA TLGSANSKPQ LVPAD