Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3217 |
Symbol | |
ID | 3368744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3853334 |
End bp | 3854221 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653568 |
Product | hypothetical protein |
Protein accession | YP_236287 |
Protein GI | 66046446 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00240946 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.367781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGA AATCCCGCAA CATAGCCTCT GCCCTGTTCC CTCTGGGACT GCTGATGATC GCCATGGTCT CCATTCAAAG CGGCGCGTCG CTGGCAAAGA GTCTTTTCCC TGTCGTGGGC GCGCAAGGCA CCACAACACT CAGGCTGGTA TTCGCCAGCC TTATCCTGGT TGCCGTCCTG CGCCCGTGGC GGGCGAATCT GACTGCAAAG TCGTTACGCA CTGTGGTGAT CTACGGCGTT GCGCTGGGCT GCATGAACCT TCTCTTCTAT ATGTCGTTGC AGACAGTACC CCTGGGAATT GCAGTAGCCC TTGAGTTCAC CGGTCCGCTG GCGGTGGCTT TGCTGTCCTC CCGCAAGCCC ATCGATTTTC TCTGGGTGAC TCTGGCAGTC ATTGGCTTGC TGCTGTTGAT CCCTCTGGGG ACCTCATCTG CCGCAATTGA TCTGCTCGGT GCCGGCTACG CCTTGGGCGC CGGTGTGTGC TGGGCCGCGT ACATCGTGTT CGGTCACAAG GCCGGCGCCG ACAACGGTGT GCAGACAGCA GCGCTCGGCG TCGTGATTGC CGCGCTCTTT ATAGGGCCGA TAGGCGTGAT ACACGCAGGC TCTGCGTTAC TGGATATTTC ACTGATACCC GCAGCATTGG GTGTCGCCAT CCTCTCGACT GCCCTGCCCT ATAGCCTGGA GATGATTGCC CTGACGCGCA TGTCGGCGCG TACATTTGGC ACACTGGCAA GCCTGGAACC CGTCTTCGCT GCGCTTTCAG GCCTGATGTT TCTTCATGAA AGCCTTTCAC TGACTCAATG GCTGGCGATC GGCGCAATCA TCTTCGCGTC CATCGGTGCA ACCCTTGGCT CGGCAAACAG CAAACCTCAA CTGGTGCCGG CCGACTGA
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Protein sequence | MSEKSRNIAS ALFPLGLLMI AMVSIQSGAS LAKSLFPVVG AQGTTTLRLV FASLILVAVL RPWRANLTAK SLRTVVIYGV ALGCMNLLFY MSLQTVPLGI AVALEFTGPL AVALLSSRKP IDFLWVTLAV IGLLLLIPLG TSSAAIDLLG AGYALGAGVC WAAYIVFGHK AGADNGVQTA ALGVVIAALF IGPIGVIHAG SALLDISLIP AALGVAILST ALPYSLEMIA LTRMSARTFG TLASLEPVFA ALSGLMFLHE SLSLTQWLAI GAIIFASIGA TLGSANSKPQ LVPAD
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