Gene Psyr_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3203 
Symbol 
ID3368725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3835366 
End bp3836373 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content58% 
IMG OID637653549 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_236273 
Protein GI66046432 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0243703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.184352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGT TTACCCCTGA TGTGATCGAC GCAATCATCG CGGTGGTCAA GGCCATCGTG 
GTGTTGCTGG CCGTCGTGGT TTGCGGTGCC CTGCTGAGTT TCATCGAGCG TCGTCTGCTG
GGTTGGTGGC AGGATCGTTA TGGCCCGAAC CGCGTGGGTC CGTTCGGCAT GTTCCAGATC
GCAGCCGACA TGTTGAAAAT GTTCTTCAAG GAAGACTGGA CCCCACCGTT CGCCGACAAG
GTGATCTTCA CCCTGGCGCC GGTGGTTGCC ATGAGCGCCT TGCTGATCGC CTTTGCGGTC
ATCCCGATCA CCCCGACCTG GGGCGTCGCG GATCTGAACA TCGGTCTGTT GTTCTTCTTC
GCCATGGCCG GTCTGTCCGT ATATGCGGTG CTGTTCGCCG GCTGGTCGAG CAACAACAAG
TTCGCCCTGC TGGGCAGCCT GCGTGCCTCG GCACAAACCG TGTCCTACGA AGTGTTCATG
GGCCTTGCGC TGATGGGCAT CGTGGTTCAG GTCGGCTCGT TCAACATGCG CGACATCGTT
GAATATCAGG CGCAGAACCT GTGGTTCATC ATTCCGCAGT TCTTCGGCTT CTGTACGTTC
TTCATCGCAG GCGTCGCGGT GACTCACCGC CACCCGTTCG ACCAACCGGA AGCCGAGCAG
GAACTGGCTG ACGGCTACCA CATTGAATAT GCCGGCATGA AATGGGGCAT GTTCTTCGTG
GGCGAATACA TCGGGATCAT CTTGATCTCG GCGCTGCTGG TGACGCTGTT CTTCGGTGGC
TGGCACGGTC CGTTCGACAT TCTGCCATCG CTGGCTTTCT TCTGGTTCGC CTTGAAAACC
GCGTTTTTCA TCATGCTGTT CATTCTGCTG CGCGCCTCCA TCCCGCGCCC GCGTTATGAC
CAGGTCATGG ATTTCAGCTG GAAGTTCTGT CTGCCGCTGA CCCTGATCAA TTTGCTGGTG
ACTGCTGCGA TTGTGTTGTT GAACACACCG GCAGGCTCGG TTCAGTGA
 
Protein sequence
MTWFTPDVID AIIAVVKAIV VLLAVVVCGA LLSFIERRLL GWWQDRYGPN RVGPFGMFQI 
AADMLKMFFK EDWTPPFADK VIFTLAPVVA MSALLIAFAV IPITPTWGVA DLNIGLLFFF
AMAGLSVYAV LFAGWSSNNK FALLGSLRAS AQTVSYEVFM GLALMGIVVQ VGSFNMRDIV
EYQAQNLWFI IPQFFGFCTF FIAGVAVTHR HPFDQPEAEQ ELADGYHIEY AGMKWGMFFV
GEYIGIILIS ALLVTLFFGG WHGPFDILPS LAFFWFALKT AFFIMLFILL RASIPRPRYD
QVMDFSWKFC LPLTLINLLV TAAIVLLNTP AGSVQ