| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3173 |
|---|
| Symbol | |
|---|
| ID | 3368695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3799848 |
|---|
| End bp | 3800846 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637653519 |
|---|
| Product | glutathione S-transferase |
|---|
| Protein accession | YP_236243 |
|---|
| Protein GI | 66046402 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0435] Predicted glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00834224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.305106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTTC TGGTCGAAGG ACACTGGCAA GACCAGTGGT ACGAAAGCAG CAAAGATGGC
GCATTTCAGC GCGAAAATGC TCAGCGACGC AGTTGGGTCA CGCCCGATGG ACAGCCGGGA
CCGTCCGGTG CAGGCGGTTT TGCTGCGCAG GCGGGCCGCT ATCACCTGTA CGTGTCTCTG
GCGTGCCCGT GGGCACACCG CACGCTTATC TTGCGCAAGC TCAAGGGCCT GGAAAGCCTG
ATCGATGTTT CGGTAGTCAG TTGGCTGATG CTGGAAAACG GCTGGACCTT CGACCAGCAG
AAAGGCTCCA GCGGCGATGC ACTGGATGAC CTGCAGTTCC TTCACCAACG CTACACCGCC
GACGACCCTC GGTACACCGG CCGTGTCACC GTTCCGGTGC TGTGGGACAA GCAGCAGCAA
TGCATCGTCA GCAACGAATC TGCGGAAATC ATCCGCATGT TCAATTCTGC ATTCGACGAG
TTGACCGGCA ATACGCTGGA TTTCTACCCG CAAGCGCTAC GCGCGAGCAT TGACGAGCTT
AACGAGCAGA TCTACCCGAA GGTCAACAAC GGCGTATACC GGGCTGGTTT CGCCACCTCG
CAGGGCGCGT ATGAGGAGGC GTTCGACGAT GTGTTCGCTG AACTGGACGT GCTGGAAAAC
CTGCTCGGCG AAAAGCGTTA CCTGACAGGC AAACACCTCA CTGAAGCAGA CATACGCCTG
TTCACCACCA TCGTGCGCTT CGATGCGGTG TATTACAGCC ACTTCAAATG TAACCTGCGG
CGCATCGCGG ACTACCCCAA TCTCAGCAAC TGGCTACGCG AGCTGTATCA GTGGCCGGGG
ATCGCAGAGA CGGTGAGTTT CGAGCACATC AAAGGGCATT ACTACGGGAG CCATCGCACC
ATCAACCCGA CCGGCATCAT ACCGAAGGGG CCCGCACTCG ATCTGCAGGC CGATCATGAC
CGTGAGCGAC TGTCCGGTGA AGGTGTCTGG AACAACTGA
|
|---|
| Protein sequence | MGLLVEGHWQ DQWYESSKDG AFQRENAQRR SWVTPDGQPG PSGAGGFAAQ AGRYHLYVSL
ACPWAHRTLI LRKLKGLESL IDVSVVSWLM LENGWTFDQQ KGSSGDALDD LQFLHQRYTA
DDPRYTGRVT VPVLWDKQQQ CIVSNESAEI IRMFNSAFDE LTGNTLDFYP QALRASIDEL
NEQIYPKVNN GVYRAGFATS QGAYEEAFDD VFAELDVLEN LLGEKRYLTG KHLTEADIRL
FTTIVRFDAV YYSHFKCNLR RIADYPNLSN WLRELYQWPG IAETVSFEHI KGHYYGSHRT
INPTGIIPKG PALDLQADHD RERLSGEGVW NN
|
|---|
| |