Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3165 |
Symbol | |
ID | 3368687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3794140 |
End bp | 3795048 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653511 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_236235 |
Protein GI | 66046394 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.314195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCA ATTTCGACCT CAACGACCTC CAGGCATTTC GTGCCGTAGT GGAGAACGGC AGCTTCCGCA AGGCCGCTGA AACCGTGCAG ATCACCCAGC CTGCGCTCAG TCGGCGGATA GAAAAGCTCG AGTCTGCACT GAACGTGAAG CTGTTCGAGC GCACCACCCG CAGGGTCAGT CTGACTACGG TCGGCCGCGC ATTTCTGCCT CAGGTCGAGC GCATTCTGGA CGATCTGGAC AGCGCATTGA TGACCATCGA AGGCGTCGGC TCCACGCGAA TGGGCAGCGT GACGATTGCC TGCGTGCCTT CAGCCGCCTA TTACTTCATG CCGCAGGTCA TCAGCGCTTT CCATCGGTTG TTTCCGAAAA TCAGAATCCG GGTGATGGAT GCCAGCGCCA ACGAGGTCAA CAGCGCAGTT GCCCTGGGCG AAGCCGATTT CGGGGTGAGT TTCAGCGGCA ATCTGGCGCC GGAAGTGGAC TTCGAACTGC TGCTGCAGGA ACGCTACGTA ATGGCCTGCA GGCGGGATCA CCCGCTGGCT ACGTGCGAAA GCGTCAGTTG GGAAGAGATG TACCGCCATG ACTACATCGC CCTGGACATC ACCTCGGGTA ATCGTCTGGT GCTGGATCAG GCGCTGGCAC CTTCGCGCCC GCACAAGGAA AGCATCTGCG AAACCCGCCA TGTCACGACG ATGATCGGCC TGGTCGAAGC GGGCCTTGGC GTGGCTGCGG TGCCCTCCAT CGCCATGCCG ATGACCGCTC ACCCGTTTCT GGTGAGCGTG CCATTGGTTG CGCCCGAGGT GATTCGCAAC GTAGGGCTGA TCAAGCGTCG TGGCAGGACC TTGACACCGG CAGCCCTCGA GCTGGAGCAA CTGGTCAGGA AAATGCCGTC ACGCTCAGCG GGGAACTGA
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Protein sequence | MPINFDLNDL QAFRAVVENG SFRKAAETVQ ITQPALSRRI EKLESALNVK LFERTTRRVS LTTVGRAFLP QVERILDDLD SALMTIEGVG STRMGSVTIA CVPSAAYYFM PQVISAFHRL FPKIRIRVMD ASANEVNSAV ALGEADFGVS FSGNLAPEVD FELLLQERYV MACRRDHPLA TCESVSWEEM YRHDYIALDI TSGNRLVLDQ ALAPSRPHKE SICETRHVTT MIGLVEAGLG VAAVPSIAMP MTAHPFLVSV PLVAPEVIRN VGLIKRRGRT LTPAALELEQ LVRKMPSRSA GN
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