Gene Psyr_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3153 
Symbol 
ID3368674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3777676 
End bp3780417 
Gene Length2742 bp 
Protein Length913 aa 
Translation table11 
GC content59% 
IMG OID637653498 
ProductBeta-glucosidase 
Protein accessionYP_236223 
Protein GI66046382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.139372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.15667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC GAAAGATGAT GGGCGCGCAC TCGGCGCTGG CCTTGCTGGC ATTGGCAGTA 
TCCCAGGTGC ACGCCGCTGA CCCTACCGTA CAACAAGGGC GTGAAGATCG CGCCGAAAAA
GCCGCACAGA AAACCCTGGC CAAGATGACC ATGGAAGAAA AGCTGGCCTA CATTGGCGGC
ACCGGCGGCT GGGACGTCAA GCCACTGACC AATTACGGCG TCCCGCAGAT CCACGGCGCT
GACGGCGGTG TGGGCGTGCG CTACACCAGC GAAGGCAACG ATCAGGGTGT TGTCTACCCG
TCCGGCCCTA ACCTGGCCGC CACCTTCAAC CCGCGTCGTG CCATCGACCT CGGCCGTGCG
CTGGGTTATG ACACTGCCGT CGGCGGCTAC CAGTTCATCA CTGGCCCCGG CGTCAACCTG
TACCGCATGC CGTACGGCGG CCGTGCGTTC GAATACCTTT CCGGTGAAGA CCCGTTCCTT
GGCGCCAGCC TGGCACCGGG CGTCATCAAC GGTATCCAGT CTCGTGGTGT ATGGGCCAAC
GCCAAGCACT ACGCGGCCAA CGACCAGGAA AGCAACCGCT TCAATCTGAA TCAGACAATG
CCAGAGCGCG TACTGCGTGA AATGTCGTTG CCTGCGTTCG AATCGTCGTC GAAAAACGGC
AATGTGGCGA TGATGATGTG TGCCTTCCAG AAGGTGAACG GTGATTTCGC CTGCGAAAGC
GACCACCTGA TCGCCCAGAT CCTGAAGAAG GAATGGGGCT TCAAAGGCTT CGTACAGAGC
GACTACAACG CTGTCGTTCA CGGTTTCAAC GCTGCCCGCG CCGGTACCGA TCTGGACATG
ATGGGCTACC AGATGAACAG CTCCGTGCTG AAGCCGCATC TGGACGCCGG CGACCTGAGC
GCTGCGACCA TCGACGACAA GGTCCGCCGC ATCCTCAAGC AGATCTACCT GTACAAGTTC
GACAGCAAGA CGCCGCTGAC CACGCACAAC ATGAACAGCT CGACCAGCAA CAAAGTTGCT
CTGAACGCTG CGCGTGAAGG TATCGTACTG CTGAAAAACC AGGACAATCT GCTGCCGCTG
GACAAGCAGA AAGTCAAGAA AATCGCCGTT GTCGGCACCC TGGCCAAGTA CTCGCCACCG
ACCGGTTTCG GCAGCGCCAA CGTCATGGCC AGCCATTACG TCAGCGAGCT GAGCGGCCTG
CAACAGATCG CGCCTAACGC CAAGGTCGAC TTCATCGAAG GCCTGTCGCT GGACCCAAGC
ACCAGTGCCT GGACCACCAC CGACGCAACT GGCAACGAAG TCCAGGGCAT GAAGGTCGAG
TACTTCAGCA ACACCAACTG GTCTGGTGAT GCAGCTGTCA CGCGTACCGA GAAGCACGTT
GACCTGGACT GGGCCAACGA CAAGAACCTG CCGTTCGAAA GCAACACTTC GACGTCCGAT
CCGTACGCCA GCAAAGGTTC GACCGCTGGC CAGCTGAATG GCGATACATC GTCGACTTCG
ATTCGCTACA CCGGCAAGGT GACTCCGACC CAGAGCGGCG AGCAGGTGTT CAAGGTGCGT
GCCGACGGCG CGGTGCGTCT GTGGGTCAAC GGCAAGAAAA TCATCGACAA CGGTGACGGC
AAGCCGCTTC CGGGCAACAG CATTCCGCCA ACCATTCCAG AGTTCGCCAA GATCAATCTG
GAAGCGGGCC AGTCTTACGA CGTGAAGCTC GAGTACTCGC GTCGTGCCGG CTACCTGTCG
ACCATGGGCG GCCTGGTAGG TGTGCAGTTG AGCTCCGCCT CGCTGAACGC TCCTCAGGAC
CTGTCCGGTT ATGACGCCGT CGTGGTTGCC GTAGGTAACA GCAACGAATA CGAAGGTGAA
GGTTTCGACC ACAGCTTCGA TCTGCCTGAG TTCCAGAACG AGCTGATCCA GAACATCGCC
AAGGTCAACC CCAATACCGT GGTGACCATG TATGGCGGTA CGGGTCTGAA GATGAGCGAC
TGGATCGAAC AGGTTCCAGC AGCGCTGCAC GCCTTCTATC CGGGTCAGAA CGGTGGTCAG
GCCCTGGCCG AGATCCTCTT CGGCAAGGTC AACCCGTCGG GCAAGCTGCC GATCAGTATC
GAACGCAACA TCGAAGACAA CCCGGCCTAC GCTTCCTTCC CGAAATTCGA CAACCAGAAC
ACTCTGACCG ACATGGATTA CAAGGATGAC CTGCTGCTGG GTTATCGCGG TTACGAGAAG
AAAGGCATCA AGCCGCTCTA TCCGTTCGGC TACGGTCTGT CGTACACCAC GTTCGGCTAC
AGCAACATCA AGGTCACGCC GGGCGTCGCG GTCGGCAATA CACCGATCAA GGTGTCCTTC
GACCTGAGCA ACACCGGCAA GGTCGGTGGT TCGGAAGTCG CTCAGCTGTA TGTGGGCCAG
CAGAACCCGA AAGTCGAGCG TCCGATCAAG GAACTCAAAG GCTACAAGAA GGTGTTCCTC
AAGCCGGGTG AAAGCAAGCG TGTGACCATC GAGCTGAATG ATCGCTCGCT GGCCTACTTC
GATGAGAAGA GCAAGCAGTG GGTGGTCGAT GCCGACACCT TCAACATCTC GCTCGGTTCG
TCGTCGCAGG ACATCCGCCT GAACGCCAAG CTGGTCAACT CGTTCCGTCA GGAACTGTCG
ACCACCAGCA GCAACCCGCT GCCACGCTCC GCTCTGAACT CGGTCCTGGT CGAGAAACCA
CCGGTCAAGA CCGGCGGTGT ATTCAAGCAG ACCGTTGAGT AA
 
Protein sequence
MNKRKMMGAH SALALLALAV SQVHAADPTV QQGREDRAEK AAQKTLAKMT MEEKLAYIGG 
TGGWDVKPLT NYGVPQIHGA DGGVGVRYTS EGNDQGVVYP SGPNLAATFN PRRAIDLGRA
LGYDTAVGGY QFITGPGVNL YRMPYGGRAF EYLSGEDPFL GASLAPGVIN GIQSRGVWAN
AKHYAANDQE SNRFNLNQTM PERVLREMSL PAFESSSKNG NVAMMMCAFQ KVNGDFACES
DHLIAQILKK EWGFKGFVQS DYNAVVHGFN AARAGTDLDM MGYQMNSSVL KPHLDAGDLS
AATIDDKVRR ILKQIYLYKF DSKTPLTTHN MNSSTSNKVA LNAAREGIVL LKNQDNLLPL
DKQKVKKIAV VGTLAKYSPP TGFGSANVMA SHYVSELSGL QQIAPNAKVD FIEGLSLDPS
TSAWTTTDAT GNEVQGMKVE YFSNTNWSGD AAVTRTEKHV DLDWANDKNL PFESNTSTSD
PYASKGSTAG QLNGDTSSTS IRYTGKVTPT QSGEQVFKVR ADGAVRLWVN GKKIIDNGDG
KPLPGNSIPP TIPEFAKINL EAGQSYDVKL EYSRRAGYLS TMGGLVGVQL SSASLNAPQD
LSGYDAVVVA VGNSNEYEGE GFDHSFDLPE FQNELIQNIA KVNPNTVVTM YGGTGLKMSD
WIEQVPAALH AFYPGQNGGQ ALAEILFGKV NPSGKLPISI ERNIEDNPAY ASFPKFDNQN
TLTDMDYKDD LLLGYRGYEK KGIKPLYPFG YGLSYTTFGY SNIKVTPGVA VGNTPIKVSF
DLSNTGKVGG SEVAQLYVGQ QNPKVERPIK ELKGYKKVFL KPGESKRVTI ELNDRSLAYF
DEKSKQWVVD ADTFNISLGS SSQDIRLNAK LVNSFRQELS TTSSNPLPRS ALNSVLVEKP
PVKTGGVFKQ TVE