Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3117 |
Symbol | |
ID | 3368638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3736038 |
End bp | 3737207 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653462 |
Product | putative lipoprotein |
Protein accession | YP_236187 |
Protein GI | 66046346 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGCACAG GCGCCCCTTT GATCAAATTC CGACTCGCCA GCCCGCTGTC GCTGCTGACC CTGCAAGCCT GCACGTCAAT GGCAGAAAGC GAAGAGCCGA AACAGCGCTT TGAAGACTAC CGTCAGCAGA CCCTCGAGCT GATCCGCAAC CAGCGCAACT TCCAGACCGC CGACCACCAG GCCGAGCTGG ACTGGAACGC GCCGCGCCAG TGGACCCCGA GCGGGACACC CAAGGGCGGC GTGCTGCTGG TGCATGGCCT GGGGGATTCG GCGTGGTCGT TTCATGACGT GGCACAGACG CTCGCTGCTC AGGGCTATCT GGTCCGAACC GTGCTGTTGC CGGGGCACGG CACCAAGCCC GAAGACATGC TCGACGTGCG CCTCGAACAG TGGCAGCAAG TGGTACGCGA ACAGGCGCAA CTGCTCGCTC GTGAAGTGCC GAAGGTCTAT CTCGGCGGCT TTTCCACCGG GGCCAATCTG GTCCTCGATT ACACCTATGG GCACGACGAA ATCGCCGGGC TGCTCTTGTT CTCGCCGGCA TTTCGCTCCA ACAGCGGCTA TGCCTGGCTG ACACCGTGGA TCGGCTGGGC ACGACCCTGG CTTGCCGCGC CGAATCAAGG CCTGCGCCCA ATGCAGACGC CGGTTCGCTA CATGAACATG CCCACCAATG GTTTTGCCCA GTTCTATCGC AGCAGCGCGC TGGCCCAGGA CCGCCTGCAT CAGCGGCGCT ATGCAAAGCC GGTGTTCATC GCCATCGCCG AGCACGACTC GGTACTCGAC ACTGATTACG TGCTGGATAA TTTCAGCCAG CGCTTCAGCA GCCCCGCCAG TCGCCTGATC TGGTACGGCG ACCTTCCCGC CCGGGCTACA GATACGCCGC GCGTCGAGGT GCGCAAGGAC TACCTGCCGG AATACCGCAT CAGCCGCTTC TCACACATGG GCCTGCTTTT TTCAGCGGAC AATCCGCTTT ACGGCGTATC CGGCAGCCAG CGTATCTGCT GGAACGGCCA GAGCACGGCG GACACCGCCA GGTGCATGGC CGGCGAGCCG GTGTGGTATT CGGACTGGGG CTATACCGAG CCAGGCAAGA TCCATGCGCG ACTGACTTTC AACCCGTATT TCGAGTGGCA GACCGAGGTG ATGCTCGGCG TGCTGAACGC AACACCGTAG
|
Protein sequence | MCTGAPLIKF RLASPLSLLT LQACTSMAES EEPKQRFEDY RQQTLELIRN QRNFQTADHQ AELDWNAPRQ WTPSGTPKGG VLLVHGLGDS AWSFHDVAQT LAAQGYLVRT VLLPGHGTKP EDMLDVRLEQ WQQVVREQAQ LLAREVPKVY LGGFSTGANL VLDYTYGHDE IAGLLLFSPA FRSNSGYAWL TPWIGWARPW LAAPNQGLRP MQTPVRYMNM PTNGFAQFYR SSALAQDRLH QRRYAKPVFI AIAEHDSVLD TDYVLDNFSQ RFSSPASRLI WYGDLPARAT DTPRVEVRKD YLPEYRISRF SHMGLLFSAD NPLYGVSGSQ RICWNGQSTA DTARCMAGEP VWYSDWGYTE PGKIHARLTF NPYFEWQTEV MLGVLNATP
|
| |