Gene Psyr_3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3095 
Symbol 
ID3368616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3710645 
End bp3711667 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID637653440 
Producttransport system permease protein 
Protein accessionYP_236165 
Protein GI66046324 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.838837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.544286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGC CGATAGCATT GAGTCATGTG CTCTGGGTTT CGGCCGTGCT GGTGCTGGCG 
ATCATGATCG GGGCCGCGAT CGGCGAAACC TCGATCAGCC TGCAGGTGGT TTTTCAGGTG
CTGGCCAACA AACTCTGGGC CGCCAGCTAT GTGCTCGACC CTATAGACGA AGGCATCGTC
TGGAACTACC GGCTGACCCG CGCCATTGTC GCAGCCGCCT GCGGGGCCGG GCTGGCGATC
TGTGGCGTGG TGTTGCAGTC GTTATTGCGC AACCCGCTGG CAGACCCGTA TCTGCTGGGG
ATTTCCGCAG GGGCCTCGAC CGGCGCGGTA CTGGTCGCCA TTCTGGGCTT CGGTGCAGGC
GCGATCTCGA TGTCGGCAGG CGCCTTTGTC GGTGCCGTGG CGGCATTTTC GCTGGTCGCC
CTGCTGGCGC ACTCTTCACG CGGCACCACG GCAGCCGGGC AGATCATTCT GGCCGGGATC
GCCGGTTCGC AACTGTTCAA TGCCCTGACC TCGTTTCTGA TCACCAAATC GGCAAGCTCC
GAGCAGGCAC GCGGCATCAT GTTCTGGCTG CTGGGTAACC TCAGCGGCGT GCGCTGGCAC
TCGGTCTGGC TGGCAGTGCC GACAGTGCTG GTCGGTCTGC TGGTGTGCCT CTGGCACCGG
CGAGCGCTGG ACGCGTTCAC CTTCGGCAGC GACTCGGCGG CGTCACTGGG GATCGCGGTA
CGCCGCGTGC AGATCATATT GATCACTACC GCCGCGCTGG TCACCGCAGT GATGGTCTCG
ATTGTCGGCT CCATCGGTTT TGTCGGGCTG GTGATCCCGC ACGCGGTACG CATGCTGGTC
GGTGTCCGGC ATGCTCGGCT GGTGCCGCTG AGTGCCTTGA GCGGCGCACT GTTCCTGATC
GCTGCCGATA TCCTCTCGCG CACGCTGATC AAGGGGCAGG CGCTGCCGAT CGGGGTGATT
ACCGCACTGA TCGGCGCACC GGTCTTCGCT TTGATTCTTA CCCGGGGCAA CAGCACGCGA
TGA
 
Protein sequence
MRLPIALSHV LWVSAVLVLA IMIGAAIGET SISLQVVFQV LANKLWAASY VLDPIDEGIV 
WNYRLTRAIV AAACGAGLAI CGVVLQSLLR NPLADPYLLG ISAGASTGAV LVAILGFGAG
AISMSAGAFV GAVAAFSLVA LLAHSSRGTT AAGQIILAGI AGSQLFNALT SFLITKSASS
EQARGIMFWL LGNLSGVRWH SVWLAVPTVL VGLLVCLWHR RALDAFTFGS DSAASLGIAV
RRVQIILITT AALVTAVMVS IVGSIGFVGL VIPHAVRMLV GVRHARLVPL SALSGALFLI
AADILSRTLI KGQALPIGVI TALIGAPVFA LILTRGNSTR