Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3087 |
Symbol | |
ID | 3368607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3694067 |
End bp | 3695485 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653431 |
Product | transcriptional regulator GntR |
Protein accession | YP_236157 |
Protein GI | 66046316 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTTA TGAAACGCTA CGAAAAATTC GCCGCCGACA TCTCGGAAAT GATTCGCAGC GGCGTCCTGC CCGCCGGGGG AAAAGTCCCG TCCGTACGGG TCGCGAGCCG CACCTGGTCC GTCAGCCCGG CGACGGTGTT CAAGGCCTAT TACCTGCTGG AAGACAAGGG ACTGATTCAG GCCCGCGCAC GCTCCGGGTA TTACGTGCGT GAGCATGCCG CCAACGCACT GACCGAACCT GAACTGATCA GACACACCAG CGAAGGCACC GAACTGGGCG TCAGCGACCT GATCTTTTCA GTGCTCGGCT CGCTCAAGGA CCCGGACACC GTACCGTTCG GCTCGGCGTT TCCCAGCCCG CACCTGTATC CGCTGGCGAG CCTGGCGAAG TCGATGGCGT CAGCTGTGCG TGCGCTGACG CCTGCTGGCA TCGTCAGCGA CATGACTACC GGGAATCCCG AGCTGCGCCG ACAGATCGCC CTGCGCTACA TGATCAGTGG CGTGCGCTTG CCGGCGGACG AACTGGTCAT CACCAATGGC GCGATGGAAG CCCTGAACCT GTGCCTGCAG TGCGTCACCG AGCCCGGCGA CCTGGTCGCC ATCGAAGCCC CGGCGTTCTA TGCCTGCCTT CAAGTGCTGG AGCGTCTGAA GCTGAAAGCC GTCGAAATCC CCGTGCATCC GCGTGACGGC GTGGACCTCG ACTCGCTGCA GGACAGCCTG ACACGCCTGC CGATCAAGGC TTGCTGGTTC ATGAGCAGCT TTCAGAACCC ATTGGGCGCG AGCATGACTC AAGAAAACAG GACCAGGCTC TACAACCTGC TGGAACAGCA GCAGATCCCG CTGATCGAGG ACGATGTGTA CGCCGAGCTG TATTACGGCG CCAACGCGCC TCACCCGGTG AAAAGCCTGG ATCGCAGTGG GCTGGTAATG CACTGCAGCT CGTTTTCCAA GACCCTCGCG CCCGGCTATC GGGTCGGCTG GGTGGCAGGC GGGCGTTACA CCGAGCAGAT TGACCGCCTC AAGCTCATGA CCACCCTCTC CCCTTCGGTC CCCGCCCAGG CCGCGCTCGC CGACTACCTC AAGCACGGCG GCTATGACCG CCATCTGCGT AAACTGCGTG ACACCCTCGA ACTGCAACAA GGCGCGATGC TCGCTGCTGC CGCCCGCTAT TTCCCGGCGG CGACACGCGT CACCCGCCCC CTCGGCGGCT ACTTTCTGTG GTTCGAATTC CCCGAGCAGG TTGATTCGCT GCAGCTCTTT CAACTCGCAC TCGCGCAGGG CATCAGCCTC GCGCCCGGCC CGATCTTTTC CGCTTCCAGG CGCTTCAAGA ATTGCGCGCG CCTGAACTAC GGCACACCCT GGGATGAACG CAGCGAGCAG GCCATGGCGA TGCTGGGGCG TATCATCGCG TCGTTCTGA
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Protein sequence | MPLMKRYEKF AADISEMIRS GVLPAGGKVP SVRVASRTWS VSPATVFKAY YLLEDKGLIQ ARARSGYYVR EHAANALTEP ELIRHTSEGT ELGVSDLIFS VLGSLKDPDT VPFGSAFPSP HLYPLASLAK SMASAVRALT PAGIVSDMTT GNPELRRQIA LRYMISGVRL PADELVITNG AMEALNLCLQ CVTEPGDLVA IEAPAFYACL QVLERLKLKA VEIPVHPRDG VDLDSLQDSL TRLPIKACWF MSSFQNPLGA SMTQENRTRL YNLLEQQQIP LIEDDVYAEL YYGANAPHPV KSLDRSGLVM HCSSFSKTLA PGYRVGWVAG GRYTEQIDRL KLMTTLSPSV PAQAALADYL KHGGYDRHLR KLRDTLELQQ GAMLAAAARY FPAATRVTRP LGGYFLWFEF PEQVDSLQLF QLALAQGISL APGPIFSASR RFKNCARLNY GTPWDERSEQ AMAMLGRIIA SF
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