Gene Psyr_3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3041 
Symbol 
ID3368561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3639886 
End bp3640956 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID637653387 
Productbacillolysin 
Protein accessionYP_236113 
Protein GI66046272 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0173986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0722993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGACG ACCGAAATCC CCTGCATTGC TTCATTCCGC CTTACATGCT CGAGCGTATG 
GCGCAATCCC CCAAGAATCT GGTCAGCGCC CGGGCCATCG CCAACCTGAC GAGTAGCTCG
GCGTTTCTCG CGTCCCGCCT CTCTGCGCGA ACCATGCCAT CCATGCACGC GATCAAATCG
CCAGACGGAC GAAAGCATCG CGTGATTCAT GATGCCAAGG GCACTGACGA TCTGCCCGGC
GCCGTGGTGC GCAAGGAAGG CCAGGCAGCG ACGGGCGACA AGGCAACCGA TGAAGCCTAC
GATGGCTCAG GCGACGTCTA CGATTTCTAT GCGCAACTGT TCGAACGCAA CTCGCTGGAC
GACAGCGGCA TGTCGCTGGT CTCGACCGTG CACGTCGCCG AAGTGGATTT CAACGGCGAT
CACGTACCGT TGAGCAACGC CTATTGGAAT GGCAGCCAGA TGGCTTACGG CGACGGTGAT
GACCTGGTCT TCAAGCGCTT TACCGGCAGC CTTGAAGTGA TCGGTCATGA ACTGACCCAC
GGCGTGCAGA GTTTCACCTC GAATCTGGAC TACCGCGGGC AATCCGGGGC CTTGAACGAG
CATTTTGCCG ACGTGTTCGG CATGCTGGTG CGCCAGTGGA AACAAGGCAC CAGCGCCGCC
GAGTCGGACT GGGTGGTGGG CAAGGAGTTG CTGGTGCCGG CGCCGACGCG ACGAGGCATT
CGCGATATGG AAAAACCCGG CACTGCCTAT TCCAACGATC CGGATCTGGG CGATGATCCG
CAACCTGCAA CGATGGCCGA CCTGTATACC GGTGCCAAGG ATCGCGGCGG TGTACACATC
AACTCGGGCA TTCCCAACCG GGCATTCGTG CTGGTGGCCA AGGCGCTGGG CGGAAATGCC
TGGGAAGTGG CGGGCAGAAT CTGGTATGAA ACGATGCTGG AGCTGGCCTC GGACAGTCAA
TTCATCGATT GTGCCAAGGC CAGCATAAAA GTAGCCTCGG ACCCACGCTT CGGCCCCAAA
GCCAAGAAAG CCGTGCAGGC GGCCTGGAAA GAGGTCGGTC TCAAGGTATA G
 
Protein sequence
MCDDRNPLHC FIPPYMLERM AQSPKNLVSA RAIANLTSSS AFLASRLSAR TMPSMHAIKS 
PDGRKHRVIH DAKGTDDLPG AVVRKEGQAA TGDKATDEAY DGSGDVYDFY AQLFERNSLD
DSGMSLVSTV HVAEVDFNGD HVPLSNAYWN GSQMAYGDGD DLVFKRFTGS LEVIGHELTH
GVQSFTSNLD YRGQSGALNE HFADVFGMLV RQWKQGTSAA ESDWVVGKEL LVPAPTRRGI
RDMEKPGTAY SNDPDLGDDP QPATMADLYT GAKDRGGVHI NSGIPNRAFV LVAKALGGNA
WEVAGRIWYE TMLELASDSQ FIDCAKASIK VASDPRFGPK AKKAVQAAWK EVGLKV