Gene Psyr_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3036 
Symbol 
ID3368556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3636310 
End bp3636960 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content58% 
IMG OID637653382 
Productregulatory protein, TetR 
Protein accessionYP_236108 
Protein GI66046267 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0300267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0658454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCG AAGAATCAGG GAATGAATCC GCAGAAACGG CCCCACCCAA GCGTCGCCGC 
GCGCCCAAGG GAGACATGCG CAGAAAGGCC TTGCTGGATG CCGCTACCGT CGTTTTTGCC
AGAGACGGCT ATTCGAGTGC GTCGATGCGC GAGGTTGCAC TGCTTGCCGG TATCACTACG
GTAGGGTTGC TGCACCATTT TCCCAACAAG GAAGCCTTGC TCGCCGCCTT GCTGGAGCGC
AGGGACCAGC GGGTCACCTC GCGTTTTCAG GATCTGGTCA CCGAGCCGAC GCTTGAAGGG
TTTCTGAAGT TTCTCAAGCT GAGCATGAGT TTCAGTATCG AGAATGCCGA GGAGTGTCAG
GCAGCGCTGC TGATGAATAC CGAGAGCCTG TCGAAGGCGC ACCCGGCATG GGCCTGGCAC
CTTGAGCGAT TCCAGCTGAC CCACGAACAC GCACGCAGCC ATTTGCAGGC GTTGATAGAA
GCGGGGGAAG TGCGCGGCGA TATCAATGTC AAAGCCCTGG CCCAGGAGAT CTTCTCGGTC
ATGGACGGCT TGCAGATTCA GTGGCTGCGA AGCCCCCGCG ACGTGGATGT CATGGCGGTT
TTCGATATCT ACGTGCAGCG ATTGGGAAGG GATATCAAGG CTCATCCATG A
 
Protein sequence
MVIEESGNES AETAPPKRRR APKGDMRRKA LLDAATVVFA RDGYSSASMR EVALLAGITT 
VGLLHHFPNK EALLAALLER RDQRVTSRFQ DLVTEPTLEG FLKFLKLSMS FSIENAEECQ
AALLMNTESL SKAHPAWAWH LERFQLTHEH ARSHLQALIE AGEVRGDINV KALAQEIFSV
MDGLQIQWLR SPRDVDVMAV FDIYVQRLGR DIKAHP