Gene Psyr_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3002 
Symbol 
ID3368522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3597756 
End bp3598796 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content62% 
IMG OID637653348 
Producthypothetical protein 
Protein accessionYP_236074 
Protein GI66046233 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACGTC TTTGTGCAGT GATGCTGGTT TTCCTGCTCG ATAGCCTTGT TTCGGTGCAC 
GCTCAGGCGG ATGAGTCCTG GAGCGCGGGC TATCACCAGT TGAGTTTCCC TGATCCGCTG
GATTCTCAGC CGGTCGAGGC TATCGCCTTT TACCCGTCGA CCGCGGCCGA GCAAGTGAGC
ATGCTTCATG GTTACCGTGT CGAGGCCGGT GAAGAAGCGC CTATTGCAAT GGGCCGTTTC
CCCTTGTTGT TGCTGTCGCA CGGCAACACC GGTACCCCGC TGGCGCTGCA TGACCTGGCC
ACTTCGCTGG CCCGCCAGGG GTTTGTGGTG GTTGCCGTGG TCCATCCTGG CGACAATGAT
CGCGATCACA GCCGTCTCGG CAGCCTGAGT AACCTGTACG GGCGACCGCT GCAGATTTCC
GAAGCGATCA GCACGGCCTT GCTCGACCCC TTGCTGGCCC CCTATCTAAA TGCCCGGCAA
GTGGGCGTGA TCGGTTATTC GGCCGGTGGC GAAACCGCGC TGATTCTCGC CGGCGCACAA
CCTGATCTGC AGCGTCTGCG TCAGTACTGC GCCGAGCGCC CGACAGACCG TGATGCGTGC
AAGACGCAGG GCGAACTGGT CGCGGACCGT GATGACCTTC ACGCTCAGGC GGATCCGCGG
GTCGGCGCAT TGATGTTGAT GGCCCCGTTG AGCCTGATGT TCGGCCGTCA CACGCTGGGT
GATGTGCACG TGCCGGTGCT GATGTACGCG GGGGATGACG ATCAGTTGCT GGCGATCGAC
CGAAACGCAG AGGCGCTGGC GCGCAAGCTG CCGCAGCCAC CCGACTACAA GTTACTGGCC
GGGGCAGGGC ACTTTGTCTT CATGGCACCG TGCAGTGATG AGCAGCGCGC GAGTGCGCCA
TTGCTGTGCA ATGACCCTGA CGGCGTGGAC CGCGAGGATA TTCACCGTAA CCTGAGTGCC
GAAGCGGTGC GCTTCTTCAG TGCGGCGCTC AATTCCGCAG ACGATGACCG TTCAGGCATG
CAGACGGCGC ATCATCAGTA A
 
Protein sequence
MVRLCAVMLV FLLDSLVSVH AQADESWSAG YHQLSFPDPL DSQPVEAIAF YPSTAAEQVS 
MLHGYRVEAG EEAPIAMGRF PLLLLSHGNT GTPLALHDLA TSLARQGFVV VAVVHPGDND
RDHSRLGSLS NLYGRPLQIS EAISTALLDP LLAPYLNARQ VGVIGYSAGG ETALILAGAQ
PDLQRLRQYC AERPTDRDAC KTQGELVADR DDLHAQADPR VGALMLMAPL SLMFGRHTLG
DVHVPVLMYA GDDDQLLAID RNAEALARKL PQPPDYKLLA GAGHFVFMAP CSDEQRASAP
LLCNDPDGVD REDIHRNLSA EAVRFFSAAL NSADDDRSGM QTAHHQ