| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2997 |
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| Symbol | |
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| ID | 3368517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3592521 |
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| End bp | 3594704 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653343 |
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| Product | glycoside hydrolase, family alpha amylase catalytic subunit |
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| Protein accession | YP_236069 |
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| Protein GI | 66046228 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACGA AGTCCACTAC ACCGGCAGAA GATAATTCAG CCCCGCTAGA CAACCCTGGC
AGTACCCCGT CTCGCATTCG TGAAGGACTT CCCTTTCCTC TCGGTGCAAG CTGGGATGGC
CTGGGCGTCA ACTTCGCCCT GTTCTCGGCA AACGCCACCA AGGTAGAGCT GTGCCTGTTC
GACTCCACTG GCGAAATCGA ACTGGAACGC ATCGAACTTC CGGAATACAC CGACGAGATT
TACCACGGCT ATCTGCCGGA TGCGCACCCG GGCCAGATCT ACGGCTATCG CGTGTACGGC
CCGTACGATC CGAAGAATGG TCATCGTTTC AACCACAACA AGCTGCTGAT CGACCCGTAC
GCCAAGCAAC TGGTCGGCGA ACTGAAGTGG TCGGAAGCGC TGTTCGGTTA CACCATCGGC
CATCCTGACG GCGACCTGAG CTTCGACGAG CGCGACAGCG CCCCTTTCGT ACCGAAAAGC
AAGGTGATCG ATGAGGCCTA CACCTGGGGC CGTGATCAGC GCGTTGGCAC GCCTTGGGAT
AAAACGATTT TCTACGAAAC CCACGTACGC GGCATCACCA TGCGTCACCC TGAGGTGGCC
GAAGAGCTGC GCGGCACGTT CGCCGGTCTC GGATCAGCGC CGGTCGTCGA GCACATTCGC
AAGCTGGGTG TGACCTCCGT CGAGCTGCTG CCGATTCATG CCTTCGTCAA CGACCAGCAT
TTGCTGCAAA AGGGCATGAC CAACTACTGG GGCTACAACA GCATCGCGTT CTTCGCCCCG
GACCCGCGTT ACCTGGCAAG CGGCAAGATT GCCGAGTTCA AGGAAATGGT TGCGCACCTG
CACCACGCCG GTCTCGAGGT CATCCTCGAT GTGGTCTACA ACCACACCGC CGAAGGCAAC
GAGCTGGGCC CTACCCTGTC GATGCGTGGT ATCGACAACG CCTCGTACTA CCGCCTGATG
CCGGACGACA AGCGCTACTA CATCAACGAC TCGGGCACTG GCAACACCCT CGACCTGAGC
CACCCTTGCG TATTGCAAAT GGTCACCGAC TCGCTGCGCT ACTGGGCTTC GGAAATGCAC
GTCGACGGCT TCCGCTTCGA CCTGGCGACC ATTCTGGGCC GCTACCACGA TGGTTTCGAC
GAGCGCCACA GCTTCCTGGT CGCCTGCCGT CAGGATCCGG TGCTGCGTCA GGTCAAACTG
GTCGCCGAGC CGTGGGACTG CGGTCCGGGC GGCTACCAGG TGGGCGGTTT CCCACCAGGC
TGGATGGAAT GGAACGACAA GTTCCGCGAC ACGGTTCGTG CCTTCTGGAA AGGCGACGAA
GCTCAACTGG CCGACTTCGC TGCGCGCATG ACTGCCTCGG GCAACATGTT CAACCAGCGC
GGTCGTCGTC CGCAGGCATC CGTGAACTTC ATCACTGCTC ACGATGGTTT CACGCTGCAT
GACCTGGTGT CGTACAACGA CAAGCACAAC GAAGCCAACG ACGAAAACAA CCAGGATGGC
AGCAACAACA ACCTGTCCTG GAACCATGGC GTCGAAGGTC CGACCGAAGA TCCGGAAATC
AACAGCCTGC GTCTGCGCCA GATGCGTAAC TTCTTCGCCA CCCTGCTGCT GGCACAAGGC
ACGCCGATGA TTGTTGCGGG CGACGAGTTC GCGCGCACTC AGCACGGCAA CAACAATGCC
TACTGCCAGG ACAGCGAGAT TGGCTGGATC AACTGGGATC TGGACGAAGA TGGCGAAGCG
CTGCTCAAGT TCGTCACCCG CGTGATCAAG CTGCGTCAGA CCTACCCGAT CCTGCGTCGC
AGCCGCTTCC TGGTAGGCGA CTACAACGAA GAGATCGGCG TCAAGGACGT CACCTGGCTT
GCTCCGGATG GCAACGAGAT GAGTGTCGAG CAGTGGCACG ATGCCAATGG CCGTTGCCTG
GGCATGCTGA TGGATGGTCG CGCACAGGAA ACCGGTATCC GTCGCGCGGG TGCCGACGCC
ACGCTGTTGC TGGTGGTCAA CGCGCATCAC GACGGCGTCA ACTTCACCCT GCCGGAAGTG
CCTGAAGGTA CCCATTACGA GTGCCTGATC GACACCAATC AGGATGATGC ACGCAGCAAG
GAGCACTTTG CGTTCGGTTC GCAATACACC GTAACGCCGC GTTCCCTGCT GCTGTTCGAA
CTGAAGCGTG AAGACCAGCA ATGA
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| Protein sequence | MNTKSTTPAE DNSAPLDNPG STPSRIREGL PFPLGASWDG LGVNFALFSA NATKVELCLF
DSTGEIELER IELPEYTDEI YHGYLPDAHP GQIYGYRVYG PYDPKNGHRF NHNKLLIDPY
AKQLVGELKW SEALFGYTIG HPDGDLSFDE RDSAPFVPKS KVIDEAYTWG RDQRVGTPWD
KTIFYETHVR GITMRHPEVA EELRGTFAGL GSAPVVEHIR KLGVTSVELL PIHAFVNDQH
LLQKGMTNYW GYNSIAFFAP DPRYLASGKI AEFKEMVAHL HHAGLEVILD VVYNHTAEGN
ELGPTLSMRG IDNASYYRLM PDDKRYYIND SGTGNTLDLS HPCVLQMVTD SLRYWASEMH
VDGFRFDLAT ILGRYHDGFD ERHSFLVACR QDPVLRQVKL VAEPWDCGPG GYQVGGFPPG
WMEWNDKFRD TVRAFWKGDE AQLADFAARM TASGNMFNQR GRRPQASVNF ITAHDGFTLH
DLVSYNDKHN EANDENNQDG SNNNLSWNHG VEGPTEDPEI NSLRLRQMRN FFATLLLAQG
TPMIVAGDEF ARTQHGNNNA YCQDSEIGWI NWDLDEDGEA LLKFVTRVIK LRQTYPILRR
SRFLVGDYNE EIGVKDVTWL APDGNEMSVE QWHDANGRCL GMLMDGRAQE TGIRRAGADA
TLLLVVNAHH DGVNFTLPEV PEGTHYECLI DTNQDDARSK EHFAFGSQYT VTPRSLLLFE
LKREDQQ
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