Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2994 |
Symbol | |
ID | 3368514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3587087 |
End bp | 3589165 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653340 |
Product | glycoside hydrolase family protein |
Protein accession | YP_236066 |
Protein GI | 66046225 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.10076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.840689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATG AGCAACTGGA GAGGCTTGCG ACCGAGGCAG GATTGTCGGT GCACTGGGTC GATGCCAACG CTCGGCCGCA GACCGTCAGC CCTGATGTGC TGCGCAAGGT ACTGGAGGCG CTGGGCTATC CTGCTGAAAA CGGCGAGGCT ATCGATGCCA GCCTGCTGCG CCTGCAAAAA GCCAGTCACG GTGCCAGTGC CCCGCCACTG CTGACGGTTG ATGTGGAAAG CAACCTGGAC CTGTCTCAGT GGTTTGCTCC ACAAACGCCA TTCACGCTAC ACCTCGAAGA CGGTTCTTCG CTGGATGCCA GACTCACCTC GAATGCAGAG CTCCCGGCAC TGGCCCCGCC CGGCTATCAA CAGCTGGAAA TTGCCGGCCA GCACCTGACC ATCGCGGTCG CGCCGAAAAC CTGCTTCAGC ATGGCAATGG CTACCGATAC CTCGAAGCCG CACGGCTGGG GGTTGACCGC TCAGCTTTAC AGCTTGCGCC GCGAAGGTGA TGGCGGCTTT GGTGACACAG AAGCACTGGA GAAGGTCTTG CGCTCTGCTG GCGAGCGAGG TGCCGACGCA TTGGGTATCA GCCCGATCCA CGCCATGTTC GCCAACGACC CTCACCGTTA CAGTCCTTAT TCCCCTTCCA GCAGGCTGTT CCTCAACAGT CTGTATGCGT CGCCGGGTGC GATTCTCGGT GAAAGTGCGT GGCGTCAGGC AATCGAAGAC GCGCGTGTCG GCGACGAGAT GAAGCGCCTT GAAACACAGA CGCTGATCGA CTGGCCAGCT GCGGCCAACG CCAAATGGAA AGCGCTTCAC GCGCTTTACG AAGGCTTCAG TGCGGGTGAT CACCCGCTGC ACGAAGACTT CAACAGCTTC CGCCACAGCG GTGGCGAAGC GCTGGAAAAT CACTGCCGCT TCGAGGCGCT GTGTGCCGAG TCCGAAACGC TGAACATCGG CAACAACTGG CATGAATGGC CGGAGCAGTT CAAAGACCCT CGCAGTGACG CAGTCGCAGC ATTTGCCAAA AGCCATCGCG AGCAAATCAG CTTTCACGCG TTCGCCCAAT GGCTCATAGC CCGTGGTCTC GAACGCGCAC AGGTTGCAGC ACGCAGCAGC GGCATGCGCG TCGGCCTGAT TGCCGACCTG GCCGTGGGTG CCGACGGTGC CGGAAGCCAG GCCTGGAGCC GCCAGGACGA GTTGCTGTCG GCCCTGACCG TCGGCGCCCC CCCTGACATT CTCAACCGTG CCGGCCAGAG CTGGGGGATT TCCGCGTTTT CGCCGGACGG CCTCAAGCGT AATGGTTTTC GTGCGTTCAT CGAGATGCTG CGGGCCAACT TTGCCCATGC CGGCGGGTTG CGTATCGACC ATGTCATGGG CTTGCAGCGT CTCTGGGTCA TCCCGCAAGG GGCACCTCCC AGCGAAGGCG CTTACTTGAA TTTCCCGCTG GATGACATGC TTCGCCTGCT GAGTCTGGAA TCCTGGCGAC ACAAGGCGAT CGTGCTGGGT GAAGACCTCG GTACGGTGCC AGAAGGCCTG AGCGAAAAAC TCAGCGCCAG AGCGATTCTC GGCATGCGCG TACTGCTGTT CGAACAGAAC AATGGTCAGT TCAGGCCGAT TCTCGACTGG TCGGATCAAG CGCTGGCGAC CACCAGTACC CACGATCTGC CCACTCTCGC AGGCTGGCTC AGCGAACTGG ATATCGAATG GAATGCCCGT CTTGGCCACA TTGACGAACA GCATGAATCG CAGTGGCGCG AAGAGCGCAC GCGGGAATAT GAAAGCCTGC GACGTGCCTT GAGCCAGAAT ATCGACAGTC TGCCCTCCGA GACTGAAGAC CCGGCCCAGA TCATCGACGC GAGCATCAGC TACCTGGGTC ATACACGTGC GCCACTGGTA CTGCTGCCGA TAGAAGACGC GCTGGGTGTC GAGGAGCAGG CCAACCTGCC CGGCACCATT GACAGTCACC CCAACTGGCG CAGACGTCTT CCCGGCGATG CGGCCTCTCT GCTTGATAAC CCGAATGCTG CTCGACGACT GGAATTACTC TCCCGATCCC GGCTGCAGGC TACGGAGCGT GATCAATGA
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Protein sequence | MNNEQLERLA TEAGLSVHWV DANARPQTVS PDVLRKVLEA LGYPAENGEA IDASLLRLQK ASHGASAPPL LTVDVESNLD LSQWFAPQTP FTLHLEDGSS LDARLTSNAE LPALAPPGYQ QLEIAGQHLT IAVAPKTCFS MAMATDTSKP HGWGLTAQLY SLRREGDGGF GDTEALEKVL RSAGERGADA LGISPIHAMF ANDPHRYSPY SPSSRLFLNS LYASPGAILG ESAWRQAIED ARVGDEMKRL ETQTLIDWPA AANAKWKALH ALYEGFSAGD HPLHEDFNSF RHSGGEALEN HCRFEALCAE SETLNIGNNW HEWPEQFKDP RSDAVAAFAK SHREQISFHA FAQWLIARGL ERAQVAARSS GMRVGLIADL AVGADGAGSQ AWSRQDELLS ALTVGAPPDI LNRAGQSWGI SAFSPDGLKR NGFRAFIEML RANFAHAGGL RIDHVMGLQR LWVIPQGAPP SEGAYLNFPL DDMLRLLSLE SWRHKAIVLG EDLGTVPEGL SEKLSARAIL GMRVLLFEQN NGQFRPILDW SDQALATTST HDLPTLAGWL SELDIEWNAR LGHIDEQHES QWREERTREY ESLRRALSQN IDSLPSETED PAQIIDASIS YLGHTRAPLV LLPIEDALGV EEQANLPGTI DSHPNWRRRL PGDAASLLDN PNAARRLELL SRSRLQATER DQ
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