| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2952 |
|---|
| Symbol | |
|---|
| ID | 3368472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3540809 |
|---|
| End bp | 3541438 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637653298 |
|---|
| Product | NADP oxidoreductase, coenzyme F420-dependent |
|---|
| Protein accession | YP_236024 |
|---|
| Protein GI | 66046183 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.824347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA CAGTAATCGG TACCGGCAAC ATGGGCTCAG CCTTTGCGAA ACAGCTTTCT
GCCGCAGGGC ACAGCGTCCG CATCACTGGC CGTGACATCA GCAAGGCGCA GGCCCTGGCC
GACCAGCACG CGAATGTCAG CGCTTATGCA GCGTCCGAAG CGTTGGGTGA CAGCCAAGTA
ATCGTGGTGG CCACCGCCTA TGCCGATGCG ACCGCTGCAC TGCAAAGCCT GGGTGACCTG
ACCGGTAAAG TGGTGATCGA TATCACCAAC CCGCTGAGCG CCGACTACAT GTCATTGACC
GTCGGCCACG TCACCAGCGC CTCGGAAGAA ATCGCCAGGG CTTTGCCCCA AGCCAACGTT
GTGAAAGCGT TCAACACCCT GTTCGCTCAA GTGCTCGCCG ATGGTCCGAA GTTCGCCAAC
GACCAGACCG GCAGCGTATT TGTCGCCAGC GACAGTGAGC GCGCCAAGCA AACCGCTATC
GCGCTGGCTC GCAGCCTGGG CTGGAACACC GTGGACGCTG GCGGCCTGGT TAACGCTCGC
TATCTGGAGC CACTGGCGGG TTTCAACATC TACCTCGGCT ACGGCGCGGG TCTGGGCACT
TCGGTCGCTC CGGTCTGGCT GAGCAAGTAA
|
|---|
| Protein sequence | MKITVIGTGN MGSAFAKQLS AAGHSVRITG RDISKAQALA DQHANVSAYA ASEALGDSQV
IVVATAYADA TAALQSLGDL TGKVVIDITN PLSADYMSLT VGHVTSASEE IARALPQANV
VKAFNTLFAQ VLADGPKFAN DQTGSVFVAS DSERAKQTAI ALARSLGWNT VDAGGLVNAR
YLEPLAGFNI YLGYGAGLGT SVAPVWLSK
|
|---|
| |