Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2945 |
Symbol | |
ID | 3368465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3535483 |
End bp | 3536385 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653291 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_236017 |
Protein GI | 66046176 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCCCA TAGACTCGTT CCAAGGCGTC ATCACCTTTG TGGTGGCAGC GCGTTCGAAT AGCTTTACCG AGGCAGCCGG GCGACTGGGT ATTTCGAAAT CGGCCGTCGG CAAATCCATA GCCCGGCTTG AAGCGCGACT GGGCGTCCAG CTGTTTCATC GCTCTACCCG TCGAATATCT CTGACTGCTG ATGGCGATGC CTATTTCATC GCCTGCTCGA ACGCGCTCGA AGAAATAGGT GCGGCTGAAA GCGGATTGGC TCCGGGAACC CGCGAACCGT CCGGACGATT GCGCATCGAT ATACCCGTGG CATTCGGGCG CCGGGTTGTC GCCCCGTTGT TATTTGAAAT CGCTAACAAG TATCCCGCGC TGCAGTTGAA TATGACTTTT TCTGACCACT TGGTCGATCC GATTGAAGAG GGGATCGACC TGCTGGTTCG TTTTGGAGAA CTCAAGGATA CCAGCGGCCT TGTTGCTCGC CGGCTTGCGC GACAACGCTG GGCTATTTGC GCCGCGCCGA GTTATCTGGC CCGTTTTGGC GTACCTGACA CCCTGGAAGA TCTGAATCGT CACCATTGCA TCGTCGGCCA TCGACGGGGC CAACCACTCT CCTGGCGAGT CAATGAAGAT CAGGAAACGG TTCGCTACGC GCCACCTTCC GCACATCAGA TCGGCGATGG CGAGGCCATG ATCCTGGCAG CCGTCGCCGG CGTCGGCCTG TGCCAGATGC CGCGCTGCCT GTTCAAGGAC GACATTGACG CGGGCCGACT GGTTGAGGTG CTGGCAGGCT ATGAACCAGA GCCCGTTGAA GTACATGCCG TATGGCCCAG GGTTTCTCAC TTGCGGCCCA AGGTGAGGTA TGTGGTTGAT GAGCTGGTGC GGTTGTGTGA GCACTGGCAG TAG
|
Protein sequence | MIPIDSFQGV ITFVVAARSN SFTEAAGRLG ISKSAVGKSI ARLEARLGVQ LFHRSTRRIS LTADGDAYFI ACSNALEEIG AAESGLAPGT REPSGRLRID IPVAFGRRVV APLLFEIANK YPALQLNMTF SDHLVDPIEE GIDLLVRFGE LKDTSGLVAR RLARQRWAIC AAPSYLARFG VPDTLEDLNR HHCIVGHRRG QPLSWRVNED QETVRYAPPS AHQIGDGEAM ILAAVAGVGL CQMPRCLFKD DIDAGRLVEV LAGYEPEPVE VHAVWPRVSH LRPKVRYVVD ELVRLCEHWQ
|
| |