| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2940 |
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| Symbol | |
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| ID | 3368460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3527685 |
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| End bp | 3531746 |
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| Gene Length | 4062 bp |
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| Protein Length | 1353 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653286 |
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| Product | PAS |
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| Protein accession | YP_236012 |
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| Protein GI | 66046171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA GCTCTCTCAC GTGGCTCGTT GGCTGGATGG CTGTGGTGCT GTTGGCCGGG
CTCAGCGTCA GCTTTATCGC CAGCCATGAA CAGCGCAGGT CGATTGATGC ACGCATAGGC
CAGGCTCTCA AAGAGGCCGG AGAGGGGATC GGCGATAACT TACAGGCACG GCTCAGGGTC
TATGAGTACC GCCTTCGAGG TCTGCGCGGT GCCGTTCACA TGCTGGACCT CCAGCATATC
AACAGCAGCC AGATGGGCCG TTACAGCAAA GGGCGCAATA TCGAGAAGGA ATACCCGGGC
GCGCGCGGAT TCGGTTTTAT CCGCCGCGTT GCGGCCAGCG ATGAGGCCGA ATTCGTAAGG
CGTGTCAGGG AGGATGGCAG GCCGGACTTC AGTCTCAGTC GATTGAGTGG ACCGGGCACC
CGGCAGGGAG ACCGTTTCAT CATTCAATTC ATCGACCCGC TGGACCGCAA TGTCCAGGCG
CTGGGGCTGG ACATTACCTC GGAGGAGCAT CGTCGCGATG CAGCCCTTCA GGCCATGCGC
AGCGGCGCTG CAACCCTGTC GGCGCCTATT ACCCTGCTGC AGGACAACGA TGATCACATG
CGCGCGTTTC TATTCCTGTT ACCGGTTTAC AGCACCCCTG AAATCCCCAC CGATATCGCC
CAGCGTGAAA CGTCCCTGAT TGGCTGGACC TATGCACCGT TGGCCATGCG GGAGGTGATG
AGCAATCTGG ACCCCTTGAA CCACAGGCTG CACTTGAAGC TTTATGACGT CAATGAAGGT
CGGCAACTGA TCTACCAGAC CCCGGAAAAC GATCATGATC AGGAGGTTTT GCAGACCTAT
GCTTTCGAGC GGGAGATCTA TGGGCGCGTG TGGCGCATGG AGGTAGGTGC TCACCCGGCA
TTTATCGCGG CCCTCGATCC GGTCCCGGCG GGCAGAGTGT TCATCATCGG CACGCTGGTC
AGCCTGATGT TGACGGTGCT GGTCGGCACG CTGCTGCTGT CCCGTCAGCG CAAGCAGCAG
GTGGTTGCCG GTCAGGCCAG GCTGGCAACC ATCGTCGAAA ACTCCAGCGA CGCGATCATC
GGTGAAGCCC TGGACGGTCG GATCATCACC TGGAACCGGG CTGCCGAGCA GATGTTTGGC
TACGACGAGC ACGAAGTGCT GGGCCGCCCA TTGGCGCCAC TGCTGGTTCC GCCAGAGCTG
GTTCACGAAG ACGAACAGCT GTTGGAAAGG GTGGCCCGCG GTGAGCGCGG GCCGACGCTG
GAAACCCGGC GGCTGCACAA GAACGGCCAG TTGATCGATG TGACCATTAC CTGCAGTTTC
ATCCGCGAGA CTGACGGCAC CCTACTCGGC GCGGCGAAAA TGATGCACGA CATCACCGAC
CGCAAGCGCG TCGAACGCTA CCTCATGGAG TTCAACGCAC AGCTTGAACA GCAGGTCAGC
GAGCGCACTG CAGAGCTGTC CAGAGTGGCG GGTTTGCTGC AGGGTGTGCT GGACGCTTCT
TCGGAAGTTT CGATCATCGC TACCGATACA CAGGGGCAGA TCTTTGTGTT CAATCGGGGC
GCTGAATTGC TGCTGGGCTA CAGCAATTCG GAAATGCTCA GTGGCAACGG CCCAGGGGTG
TTTCATCTTC CTGAAGAAGT GGCCGCACGC TCCGCCGAGC TGAGTCGTGA ATACGGCACC
CTGATCGAAG GCATTGACGT CTTTTGCTAC AAAGCGTCCC GCGAAGGCTC GGAAACCCGG
CAATGGACCT ACGTGCGCAA GGATGGCACG ACGGTGCCTG TGCTGATGAT CATCACCCCG
ATCCGTACCG CCGACGGAGA ACTCATCGGT CATCTGGGTA TTGCTCAGGA CATCACCGAA
CGGCTGCACC ATAGCGCCGA GTTGCACGCG GCCAAGTCCA GCGCCGAGGC TGCCAATGCG
GCCAAGAGTC TGTTTCTGGC CAACATGAGC CATGAAATCC GCACGCCCAT GAATGCCGTG
ATCGGCATCT CCCATCTGCT ACACAACACC GCCTTGAACG ACCAGCAGCG CCAGTTGCTG
ACCAAACTGC AGATTGCCGG CCGGACATTG TTGGGGATCA TCAACGATAT CCTCGACATC
GCCAAGATCG AGGCGGGAGA GATGCGCCTG GAACATAACC CCTTCAGCCC CCGGCAATTG
CTCGACGAAC TGGGCGAGCT GTTCACGCCC CAGGCACAGG AAAAAGGCCT GCGCTTTTCT
GTCAACGTTG TGGCATCGCT GCCTGGCCAG TTGATAGGTG ACGCATTGCG AGTCAACCAG
ATCCTCATGA ATCTGGTCGG CAATGCGCTC AAGTTCACCA GTGTCGGCGG AGTCGATGTG
ACGGTCAGCC GTGAGGACGA TCACGCCGAC ACCTGCTGCT TGCGCTTCTC TGTGCAGGAC
ACCGGCTGCG GCATACCGGG CGATGTGCTC GGCCAGTTGT TTTCGCCGTT CACTCAGGCG
GATGCGTCCA CCACGCGGCG GTTTGGCGGC ACCGGACTGG GTTTGTCGGT GGTGCGCGGG
CTGGCCGAGC AGATGGGCGG CCGTATAGGG GTGGAGAGCG AACTCGGCAC AGGTAGCGAG
TTCTGGGTGG AGTTGCCGTT CCAGATCAGC CAGAGCGACC TGGAGCCGTC CGGCCCGGGA
AGCAGTCTGG AGGTCATGCT GCTCAGCGAC GACGCGCAAT CGTCCATGGC GTTGCAACGC
TTATGCCGCG GCCTGGGCTG GCGTGTGGCG AGTCTGACCG GCGAACATGA CCTGCGCACT
GCCTTGCAGG AGCGTAATCA CGTTAACGCG GCATTGCCGG ATGTACTGTT GGTGGACTGG
CAGCAGCCGC AGGTTGAGGA GGTGCAGCAG TTGATCGAGG CGACGCCGCT TCCGGTCATT
CTGGTGACAT CGTCCGAGAT CCGGGCAGAA CTGCACCCTC TGGTCGACAA GGTATTGCTC
AAGCCGCTGG ACAGCTCGGC CTTGTTCAAC GCGGTCAACG CTTGTATCGC CAGGTATCAG
GGCAGCACCG AACGGGTTAT CCAGGCCACG CGGATGGATA CCTCCATGAC GCTCTGGTTG
AGTGGATTGC ACCTGCTGCT GGTGGACGAC AGCGAGATCA ACCTGGAGGT TGCCAGCCTG
TTGTTGCAGC AGCAGGGCGC TGTGGTCCAG ACCTGCAGCA ATGGTCTGCT GGCCCTTGAA
CGACTGCGGC AGACGCCGGA TTTCTTCGAT GCTGTGCTGA TGGATGTGCA GATGCCGGAA
ATGGATGGCT ATGAGGCGAC GCGGCGCTTG CGCAGCGAAC TGGGCCTGAC ACGCTTGCCC
GTGCTGGCGT TGACCGCAGG CGCCCTGGCA GAAGAGCGGC GGCAGGCCGA GCTGGCGGGT
ATGGACGATT TCCTCACCAA ACCTCTGGAC CCCGCAGCCT TGATCCGGGC GGTACGTCGT
GCCGTCGAGC GTGTCCGAGG TGCTCCGCTG GCGGTCGGCA CCTTGCTGCA GGAAGCATCG
ACAGGCTCTG CATGGCCGGT TATCGAAGGT ATCGACACCC AGGAGGTCGC CGCTCGGCTA
GGCAATGATG TGCCCTTGTT TCTCTCGTCC CTGCGGCGCT TTTTCAGTGA ATTTGCCGCG
TTCGGCGAGA GCGAGAGCGT TCTGGCACGG GCGCGACAAA ACCCCGATCA AACAATGGCT
GATCTGCACA AATTGCGCGG TTCTGCACTG CTGCTTGGCG CCACGCAAGT GGGCCTGCAT
GCCGGGCAGG CGGAAACCCT GCTGCGCAAC GCTGCGGACC CGGAGCAGGC TGTGCGAGCC
CTGAGTGCCG CTTTCCGGTC ATTGCAGGAG CGCACGCCGG TACTTGAGGA AAGGCCACTG
GCCCCGCGTA TCGATGCGGA TCCCGATGTT TCCCGACAGG CATTGTCGAC CTTGCGTGAA
CTGCTTGAAA ACCATGATAT CGCCGCGCTG GACCAGTTTC CGCTGGCTGC TGTGGCGCTT
CAGGAGCTGG CCGGACAGGC ACTGGTCGAA CAGCTCTGGC AGACCATTGA AGGGCTGGAG
TTCGAGCAGG CACTGCACCT GCTCGAACGT GCGGAATTAT AA
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| Protein sequence | MKKSSLTWLV GWMAVVLLAG LSVSFIASHE QRRSIDARIG QALKEAGEGI GDNLQARLRV
YEYRLRGLRG AVHMLDLQHI NSSQMGRYSK GRNIEKEYPG ARGFGFIRRV AASDEAEFVR
RVREDGRPDF SLSRLSGPGT RQGDRFIIQF IDPLDRNVQA LGLDITSEEH RRDAALQAMR
SGAATLSAPI TLLQDNDDHM RAFLFLLPVY STPEIPTDIA QRETSLIGWT YAPLAMREVM
SNLDPLNHRL HLKLYDVNEG RQLIYQTPEN DHDQEVLQTY AFEREIYGRV WRMEVGAHPA
FIAALDPVPA GRVFIIGTLV SLMLTVLVGT LLLSRQRKQQ VVAGQARLAT IVENSSDAII
GEALDGRIIT WNRAAEQMFG YDEHEVLGRP LAPLLVPPEL VHEDEQLLER VARGERGPTL
ETRRLHKNGQ LIDVTITCSF IRETDGTLLG AAKMMHDITD RKRVERYLME FNAQLEQQVS
ERTAELSRVA GLLQGVLDAS SEVSIIATDT QGQIFVFNRG AELLLGYSNS EMLSGNGPGV
FHLPEEVAAR SAELSREYGT LIEGIDVFCY KASREGSETR QWTYVRKDGT TVPVLMIITP
IRTADGELIG HLGIAQDITE RLHHSAELHA AKSSAEAANA AKSLFLANMS HEIRTPMNAV
IGISHLLHNT ALNDQQRQLL TKLQIAGRTL LGIINDILDI AKIEAGEMRL EHNPFSPRQL
LDELGELFTP QAQEKGLRFS VNVVASLPGQ LIGDALRVNQ ILMNLVGNAL KFTSVGGVDV
TVSREDDHAD TCCLRFSVQD TGCGIPGDVL GQLFSPFTQA DASTTRRFGG TGLGLSVVRG
LAEQMGGRIG VESELGTGSE FWVELPFQIS QSDLEPSGPG SSLEVMLLSD DAQSSMALQR
LCRGLGWRVA SLTGEHDLRT ALQERNHVNA ALPDVLLVDW QQPQVEEVQQ LIEATPLPVI
LVTSSEIRAE LHPLVDKVLL KPLDSSALFN AVNACIARYQ GSTERVIQAT RMDTSMTLWL
SGLHLLLVDD SEINLEVASL LLQQQGAVVQ TCSNGLLALE RLRQTPDFFD AVLMDVQMPE
MDGYEATRRL RSELGLTRLP VLALTAGALA EERRQAELAG MDDFLTKPLD PAALIRAVRR
AVERVRGAPL AVGTLLQEAS TGSAWPVIEG IDTQEVAARL GNDVPLFLSS LRRFFSEFAA
FGESESVLAR ARQNPDQTMA DLHKLRGSAL LLGATQVGLH AGQAETLLRN AADPEQAVRA
LSAAFRSLQE RTPVLEERPL APRIDADPDV SRQALSTLRE LLENHDIAAL DQFPLAAVAL
QELAGQALVE QLWQTIEGLE FEQALHLLER AEL
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