Gene Psyr_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2905 
Symbol 
ID3368425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3484201 
End bp3485778 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content62% 
IMG OID637653251 
ProductABC transporter 
Protein accessionYP_235977 
Protein GI66046136 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.252651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAA ACCTGATCGA AATCCGCGAC CTGAGCGTCG CCTTCAACGG GCAAAAAGTG 
GTCAGCAACC TGAGCCTGGA TGTGCGCCGC GGCGAGTGCC TGGCACTGGT CGGCGAGTCC
GGTTCCGGCA AGTCGGTCAC CGCGCATTCG ATCCTGCAAT TGCTGCCCCG CAGCGGCACC
CTGACCACGG GCAGCATCAC CTACCGGGGT CAACAGCTGG TGGGGGCCGA CGACCGCACC
CTTCGCGAGC TGCGTGGCAA CCGGATTGCG ATGATTTTCC AGGAACCAAT GACCTCGCTG
AACCCGCTGC ACAGCGTAGC CAAGCAAATC GGCGAGACAT TGTTGCTGCA TCGCGGCGTC
AGTGGGCGTG AAGCGCAGAA ACGCATTGTC GAGCTGCTGG AGCTGGTCGG TATTCAGCAG
CCGGAAAAAC GCCTGAAAGC CTATCCGCAC GAACTCTCCG GAGGCCAGCG TCAGCGGGTG
ATGATTGCCA TGGCACTGGC CTGCGAACCG GAGCTGCTGA TTGCCGACGA ACCCACCACT
GCGCTGGACG TCACGGTACA ACGCAAAATC CTCCTGCTGC TCAAGGAGCT GCAGCAGCGC
CTGAACATGT CGCTGCTGTT GATCAGCCAT GACTTGAATC TGGTGCACAG CGTCGCTCAG
CGCGTCTGCG TAATGCGCGC CGGCGAAATC GTCGAGCAGT CCGATTGCAA GTCGCTGTTC
AAATCACCTC AGCATCCCTA CAGCCGCCTG CTGCTGGACG CCGAACCTGC CGGCGAGCCG
CTGCCACGCG ACACCCGGGA AACGGTGCTG CAAGTCGACA ACCTGAAGGT CTGGTTTTCC
CTGACCGGCG GCATCCTGCG GCGGCACAGG GAATACCTCA AGGCGGTGGA TGACATCAGC
CTGAGCATCG AGCGCGGCAA GACCCTGGGT ATCGTCGGTG AGTCGGGTTC CGGCAAGTCG
ACCCTGGGTC AGGCGATCCT GCGTCTGCTG GAGTCACGCG GCAGTATCCG CTTTCGCGGG
CAGGCGCTGG ACGGCCTGAG TCAGAAACAG ATGCGCCCGT GGCGTAAAGA GATGCAAGTG
GTCTTTCAGG ACCCTTACGG CAGCCTCAGC CCGCGCATGT CGGTGGCGCA GATCATCAGT
GAGGGGCTGG AGGTGCACAG CCAGTACAAC CCGGCGAAAT GCGATGCAGA GGTCATTCGG
GCGCTGGAAG AAGTCGGCAT CGACCCGCAG AGTCGGCATC GCTACCCCCA TGAATTTTCC
GGTGGCCAGC GTCAGCGCAT CGCCATTGCC CGGGCGCTGG TGCTGAAACC CGCACTGATT
CTGCTCGATG AGCCGACATC GGCGCTGGAC CGTACCGTAC AGAAACAGGT CGTGGCGCTG
CTGCGCGAAC TTCAGGAAAA GCATGGCCTG ACGTATCTGT TCATCAGCCA TGACCTGGCA
GTCGTCAAAG CCCTCGCCCA CGACGTGATC GTGGTCAAGG ATGGCAAAGT CGTCGAGCGT
GGCGCGAGCC ATGATGTCTT CGAGGCACCG CAACATCCCT ACACGCAGGA ATTGCTGGCG
GCCGCGCATC CGGAATGA
 
Protein sequence
MSENLIEIRD LSVAFNGQKV VSNLSLDVRR GECLALVGES GSGKSVTAHS ILQLLPRSGT 
LTTGSITYRG QQLVGADDRT LRELRGNRIA MIFQEPMTSL NPLHSVAKQI GETLLLHRGV
SGREAQKRIV ELLELVGIQQ PEKRLKAYPH ELSGGQRQRV MIAMALACEP ELLIADEPTT
ALDVTVQRKI LLLLKELQQR LNMSLLLISH DLNLVHSVAQ RVCVMRAGEI VEQSDCKSLF
KSPQHPYSRL LLDAEPAGEP LPRDTRETVL QVDNLKVWFS LTGGILRRHR EYLKAVDDIS
LSIERGKTLG IVGESGSGKS TLGQAILRLL ESRGSIRFRG QALDGLSQKQ MRPWRKEMQV
VFQDPYGSLS PRMSVAQIIS EGLEVHSQYN PAKCDAEVIR ALEEVGIDPQ SRHRYPHEFS
GGQRQRIAIA RALVLKPALI LLDEPTSALD RTVQKQVVAL LRELQEKHGL TYLFISHDLA
VVKALAHDVI VVKDGKVVER GASHDVFEAP QHPYTQELLA AAHPE