Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2896 |
Symbol | uvrC |
ID | 3368416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3474485 |
End bp | 3476308 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653242 |
Product | excinuclease ABC subunit C |
Protein accession | YP_235968 |
Protein GI | 66046127 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.189646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.894143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA CATTTGATCC AGGTGCATTT CTCGCGACCT GTAGCGGTCG CCCCGGCGTC TACCGTATGT TCGACGCCGA AGCCACACTG CTTTACGTCG GCAAGGCCAA GAACCTCAAG AAGCGTCTTG CCAGCTACTT CCGCAAGACC GGACACGCGC CCAAGACCGG AGCGCTGGTG TCGCGTATCG CCCAGATCGA AACCACCATC ACGGGCAACG AAACCGAAGC GCTGTTGCTG GAGCAGACCC TCATCAAGGA GTGGCGGCCC CCGTACAACA TTCTCCTGCG TGACGATAAA TCCTATCCCT ATGTGTTTCT GTCCGACAAC GCCTTTCCGC GGCTGAGCAT TCATCGTGGC ACCAAGAAGG CCAAGGGTCG CTATTTCGGG CCTTACCCGA GTGCGGGCGC GATTCGCGAG AGCCTCAGCC TGCTGCAGAA GACTTTCCAG GTACGGCAGT GCGAGGACAG CTACTTCAAG AACCGCACCC GTCCTTGCCT GCAATATCAG ATCAAACGCT GCAAAGGGCC GTGTGTCGGG CTGGTCGAGC CTGAGGTGTA TGCCGAGGAC GTACGTCACT CGGTAATGTT CCTCGAAGGG CGCAGCAATG CCTTGAGCGA CGAGCTGAAC GCGTCGATGG AAAAAGCCGC GATGGCGCTC GATTTCGAAC GCGCAGCCGA GTTGCGTGAT CAGGTGGCCT TGTTGCGCCG CGTCCAGGAT CAGCAAAGCA TGGATGGCGG CACCGGCGAT GTCGATGTGG TCGCCGCGTT CGTCAACCCT GGCGGTGCCT GCGTGCACTT GATCAGCGTG CGGGGCGGGC GGGTGCTGGG CAGCAAGAAC TTCTTCCCGC AGGTGGGCAT AGAAGAGGAG GTCGGCGAAG TGATGTCGGC ATTCCTGGCT CAGTATTTCC TCGGCGGCAT CGACCGTGAG CTGCCCGGCG AAGTCATCGT CAATGTCATC AACGACGATT TCCCTGCGTT CGTCGACGCC GTCGAAGAGC TGCGCGGCGT CGAGATGGTC ATCAGTCATC GCGTGCGCGG CACTCGGGCG CGCTGGCAGC AAATGGCGGT CACCAATGCC GAGCAGGCGC TGACCGCGCG GCTGGCCAAC CGTCAGCATG TGGCGTCGCG GTTCGAAGCG CTGGCCAAGG TGCTGGGTCT CGAAGACCCG CCAATGCGCC TGGAATGCTA CGACATCAGC CACTCCAGCG GTGAGGCGAC CGTAGCGTCG TGCGTGGTGT TCGGCCCCGA AGGCCCGATC AAGTCCGATT ACCGGCGTTT CAATATCGAA GGCGTGACGG CGGGCGACGA CTACGCCGCC ATGCACCAGG CGTTGACCCG ACGTTACAGC CGCATCAAGG CCGGGGAGGG CAAGTTGCCT GACGTGCTGC TGGTGGACGG CGGCAAGGGG CAGATGTCCA TGGCGCGCGA CGTGCTCAAT GAATTACAGG TTCCTGAGCT CATCCTGCTC GGTGTTGCCA AGGGCACCAC GCGCAAGGCC GGTTTCGAAA CCCTGTACCT GAACGACTCA GCACATGAAT TCACGCTGCC CGGCGACTCT CCGGCCCTGC ACCTTATCCA GCAGATTCGC GACGAAGCAC ACCGTTTCGC AATCACCGGC CACCGTGCCC GTCGGGGCAA GACCCGGCGC ACATCGACCC TTGAGGGCGT GGCGGGTGTC GGGCCGACCC GGCGTCGAGA CCTGCTCAAA CATTTCGGCG GATTGCAGGA ATTGTCCCGT GCCAGCATCG ATGAAATAGC AAAAGCACCC GGAATCAGCA AAAAGCTGGC AGAGTCGATT TATGCAAACC TGCACAGCGA GTAG
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Protein sequence | MTQTFDPGAF LATCSGRPGV YRMFDAEATL LYVGKAKNLK KRLASYFRKT GHAPKTGALV SRIAQIETTI TGNETEALLL EQTLIKEWRP PYNILLRDDK SYPYVFLSDN AFPRLSIHRG TKKAKGRYFG PYPSAGAIRE SLSLLQKTFQ VRQCEDSYFK NRTRPCLQYQ IKRCKGPCVG LVEPEVYAED VRHSVMFLEG RSNALSDELN ASMEKAAMAL DFERAAELRD QVALLRRVQD QQSMDGGTGD VDVVAAFVNP GGACVHLISV RGGRVLGSKN FFPQVGIEEE VGEVMSAFLA QYFLGGIDRE LPGEVIVNVI NDDFPAFVDA VEELRGVEMV ISHRVRGTRA RWQQMAVTNA EQALTARLAN RQHVASRFEA LAKVLGLEDP PMRLECYDIS HSSGEATVAS CVVFGPEGPI KSDYRRFNIE GVTAGDDYAA MHQALTRRYS RIKAGEGKLP DVLLVDGGKG QMSMARDVLN ELQVPELILL GVAKGTTRKA GFETLYLNDS AHEFTLPGDS PALHLIQQIR DEAHRFAITG HRARRGKTRR TSTLEGVAGV GPTRRRDLLK HFGGLQELSR ASIDEIAKAP GISKKLAESI YANLHSE
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