| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2878 |
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| Symbol | |
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| ID | 3368397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3453158 |
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| End bp | 3454786 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637653223 |
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| Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
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| Protein accession | YP_235950 |
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| Protein GI | 66046109 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.425048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.909341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGAC AGCTGAAAAT AGCCGCGCGG ACCTCCGCCT GCTTTGCGTT GATGGTGGTG
CTGGTGTTCG GGCTTGGTAT TTTCAGCATT CAGCAATTGC ACGGTATTCG TGAGCAATCG
CTTGAAATAG AAAACGATGC GCTTCCCGGG ATTGCGCTAG GTGACGATAT TGCCCTGGCG
GTCGAGAAAA CCCGCACGAC GGTGGCCAAA ATGCTTGCCG CTCATGATAT GGCGCAGGTG
ACTCTGGCTC ACACCGAGTT CCTTGACAGG AAGGCCGGGT TCCAAAAGGC CGTAGAGGCC
TACGACCCGC TGATCACCGA GGATGACGAG CGCGCGCTCG TCGAGGGGCT GAAGAGCACT
TATCAGGGCT ACATCGAGCG TGCCGAGAAG GTCTATACGC TGATCAACGA GAATCAGGCG
GAGGCCGGAA GGGCGCTGGT CTGGGGCGAG ATGAAGGTCA TGGCGGAAGG TATGGAAACG
GCCCTTGGCA AGCTGGAAAA GATCAATGAT GACTCCGAAG CCGAATCCAG CGCAGCAGCG
ACGTCGGTGT ATGAAAACGC CCTGATCGTC ACTCAGGGGG TCATGTTTCT GACGGTGTTG
CTGACCGTAT TGCTTGCCTG GCGTCTGACC AAAAGTCTGG CAGTGCCGAT CAGTCAGGCG
CTGCACAGCT CGGAAACCAT TGCCGCGGGC GACCTGCGTC CCAGCGCAAT CAACCGTGAG
GGCACTGATG AAGCGGCCCT GTTGCTGCAA TCGATGGAGC GCATGCGCGG CAATCTGAGC
CAGACCCTGA GTCAGGTGGG CGATGCCGCT CACCAGTTGG CGTCGGCCAC GGAAGAAATG
AGCGCCTTGA TGGTCAACAG CAACGCCGAT CTGGTGGTGC AGAACAGCGA AATAGAAATG
GCCGCCACCG CGGTCACCGA GATGAGTCAG GCGGTCGATG AAGTCGCGCG TAATGCGGTG
ACCACTTCGG TGGAATCCAG AGCCTCTTCG GTGTCGGCCC GCGAAGGTCA GGAAGAGCTC
AATCAAACCG TCAAATCGAT CCTTGAGCTG ACCCGAAATG TGGGCACGGC GTCGGTCGAG
GCGCAGGCGC TGGCAACCCG CACGCTGGAT ATCACCAAGG TGCTGGATGT CATTCGCGCG
GTGTCCGAGC AGACCAACCT GCTGGCGCTG AACGCTGCCA TTGAAGCGGC ACGCGCGGGC
GATGCCGGAC GGGGTTTTGC CGTGGTCGCC GACGAGGTGC GCGCGCTGGC CCACCGCACC
AGCGAATCGA CGCGCGAGAT CGAAACCATG GTCGGGCACA TCCAGCAGGG CACCAAAAGT
ACCCTGCTTG CGCTTGAAGT CAGTACCGAA CAGGCGCAAC GCACCAAACA ACAGGCCGAG
TCGGCCAATG CCGTGCTGGC CAGCATCGCC AGCTCGGTTA TGGTTATCGA TGAGCGCAAT
ACGGTGATCG CCAGCGCCTC CGAGGAGCAG GCACTGGTTG CGCGGGAAGT GGACCGCAAC
CTGGTGCGCA TCCGTGACTT GTCGGCACAA TCGGCGGTGC GCACCAGCCA GACCGGCAGC
GCCAGCCAGT CGCTGGCCGA GCTGGCGAGT GACCTGACGA TCACCCTGGG GCAATTCAAG
CTCGGATAA
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| Protein sequence | MLRQLKIAAR TSACFALMVV LVFGLGIFSI QQLHGIREQS LEIENDALPG IALGDDIALA
VEKTRTTVAK MLAAHDMAQV TLAHTEFLDR KAGFQKAVEA YDPLITEDDE RALVEGLKST
YQGYIERAEK VYTLINENQA EAGRALVWGE MKVMAEGMET ALGKLEKIND DSEAESSAAA
TSVYENALIV TQGVMFLTVL LTVLLAWRLT KSLAVPISQA LHSSETIAAG DLRPSAINRE
GTDEAALLLQ SMERMRGNLS QTLSQVGDAA HQLASATEEM SALMVNSNAD LVVQNSEIEM
AATAVTEMSQ AVDEVARNAV TTSVESRASS VSAREGQEEL NQTVKSILEL TRNVGTASVE
AQALATRTLD ITKVLDVIRA VSEQTNLLAL NAAIEAARAG DAGRGFAVVA DEVRALAHRT
SESTREIETM VGHIQQGTKS TLLALEVSTE QAQRTKQQAE SANAVLASIA SSVMVIDERN
TVIASASEEQ ALVAREVDRN LVRIRDLSAQ SAVRTSQTGS ASQSLAELAS DLTITLGQFK
LG
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