| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2864 |
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| Symbol | |
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| ID | 3368383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3435495 |
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| End bp | 3436901 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653211 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_235938 |
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| Protein GI | 66046097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0383351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.128914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTTT TCTGGCCTTC GCTGGCTGTC ACGGCGCTGC TTGCGGGCTG CGTCAACCTG
GCCCCGGACT ATCAGCGCCC TGAAGCGCCG GTCTCAAGCC AATGGCTGCC GGGTACTGCT
GGCCAACCGG CTGCGTCGGG CAGCGTGCCC ACGGACATCG AATGGCAGAA TTTTTTCATC
GATAACCGCC TGGTGCGCCT GCAGACCCTG GCGCTGGTGA ATAACCGCGA CCTGCGCCTG
GCCAGCCTCA ACGTCGAGAA AGCGCAGGCG CAATATCGCA TCGAGCGGGC GGCGAGCCTG
CCGACCATTG ATGCCAGTGG CAGCGGCACG CATACACGCA CGCCGTCATC GACCTCGATG
ACCGGCAAGC CGTCGATCAG CCACGAGTAC AGCGCGCAGT TGGGCTTGAG CAGCTATGAG
CTGGATGTGT TCGGGCGTAT CCAGAACCTT CAGGACGAAG CGCTTGAGGA TTATCTGGCG
TTGACCGAAA CCCGGCGCAG CACGCAGATC AGCCTGATCG CCGAAGTGGC GACCGGCTGG
CTGACCCTGG CCGCCGACAA CCAGCTTCTG AAACTCGCCG AAGACACGTT GGCCAGCCAG
CAGAAAAGCT ACGACCTGAC CAGAAGCAGC CATGCGCTGG GCGGTTCTTC CGGGCTGGAA
GTGGCTCAGG CGCAGACAAC GGTCGAATCG GCGAGGGGCG ATGTCGCGCA ATATAAAAGC
CAGATTCTTC AGGACCGTAA CGCCTTGCGC CTGCTGGTCG GCAGCGATCT GCCGGAGGAA
CTGCTGCCCA ATGCCGACAC GCAGTCGGTG GCGCAATTGG TGCAGGTGCC GGACGGCCTG
CCTTCCAGCC TCCTGCAACG CCGCCCGGAC GTGCTGAGTG CCGAACACAC ACTTAAAGCC
GCGAACATTG ATATCGGTGC AGCGCGTGCG GCGTTCTTCC CCAGTATCAC CCTGACTGCC
AGTGCAGGCT CTTCCAGCAC CAGCCTGTCA GGCCTGTTCA AGTCCGGAAC CGGCGCGTGG
AGCTTTGCGC CAAGTATCAG CGTGCCGATT TTCGATGGCG GCGCCAATCG GGCCACGCTG
GACTCGGCCA AGGTCGAGAA CCAGATCCAG ATTCAGACCT ATCAGCAGAC GATCCAGACC
GCATTCAAGG AAGTGGCCGA TGCCTTGGCG GTGCGCAGCA CGCTGGATGA GCGGCTTGCC
GCGCAGCAGG CCTACACCGA TGCCAGCCGC AGAAGCTACG AACTGGCCGA CGCCCTGTAC
CGCGGCGGAT CGCAGAGTTA TCTGGAGGCG CTCGAGTCGC AACGCTCGCT CTACAGTGCC
GAGCAGGACC TGATTTCCCT GCGCCTCACA GAGCAGAGCA ACCGCGTCAC GCTCTACAAG
GTCATGGGCG GCGGATGGAA TCGGTGA
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| Protein sequence | MRLFWPSLAV TALLAGCVNL APDYQRPEAP VSSQWLPGTA GQPAASGSVP TDIEWQNFFI
DNRLVRLQTL ALVNNRDLRL ASLNVEKAQA QYRIERAASL PTIDASGSGT HTRTPSSTSM
TGKPSISHEY SAQLGLSSYE LDVFGRIQNL QDEALEDYLA LTETRRSTQI SLIAEVATGW
LTLAADNQLL KLAEDTLASQ QKSYDLTRSS HALGGSSGLE VAQAQTTVES ARGDVAQYKS
QILQDRNALR LLVGSDLPEE LLPNADTQSV AQLVQVPDGL PSSLLQRRPD VLSAEHTLKA
ANIDIGAARA AFFPSITLTA SAGSSSTSLS GLFKSGTGAW SFAPSISVPI FDGGANRATL
DSAKVENQIQ IQTYQQTIQT AFKEVADALA VRSTLDERLA AQQAYTDASR RSYELADALY
RGGSQSYLEA LESQRSLYSA EQDLISLRLT EQSNRVTLYK VMGGGWNR
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