Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2815 |
Symbol | |
ID | 3368333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3389670 |
End bp | 3390704 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637653164 |
Product | hypothetical protein |
Protein accession | YP_235892 |
Protein GI | 66046051 |
COG category | [R] General function prediction only |
COG ID | [COG3943] Virulence protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.213356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.859247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAAGG ATGCAGATGT TGGTAGTAAG GATGCGGCAG CCGAAAATAC AATTTCTTTC GTGCGCGATG GATCAAATGT AAAGCTTAGG TTCGAGCCTG GACAGCAAGC AATGTGGGCA ACCGCCCAAA ACATGGCAGA CCTGTTTGAG ACCACAGCAG ACAATGTCGG ACTTCACCTA AAAAACATAT TTGCTGTTGG GGAGCTGGAT GAAAAGGCAA CTACCGAGGA TTTCTCGGTA GTTCGAAGGG AGGGCGGCCG CTTCGTCGAA CGTAGCATAA AACACTACAA TCTGGATGCT ATTCTCTCGG TCGGTTATCG AGTCAACGCC AAAAATGCTG TTGCGTTCCG GCAATGGGCT ACGCAGGCTC TGCGAACCTA CATCGAGCAA GGGTATGTAA TCAACGAGAA GGCTCTGCGT GAGTCTCCTG AAAAGCTGAA CAAACTGGCC GCCGCAGTTC GGGCGCTCCG GTCCGAAGAG AAGCAGGTAT ACGCCAAGGT TAGAGAATGC TTCAAGATTT GCGCATCAGA TTATGACCCA AACTCCAAGG AGGTAAGGAG CTTTTACGCC TTGTTGCAAG ACAAATTCCA CCACGCAGTC ACAGGCATGA CCAGCTCAAA GCTGATTCTT GATCGCGCGG ACCACCATTT AGAAAATATG GGCATGCTAG CTATAAAGGG CACAAACCCC ACGGCGGAAG AAGCGAAGAC AGGTAAGAAC TACCTAAATA ATGAAGAGCT GTATCGTCTC CATTTGCTCT CGGAGCAGTT CATGCTTTAT GCCGAAAGCA CCGCCCTTAC TAAGCGTCCT ATGACCATGA GTTCGCTTCA TGAAAAGCTT GATGCTCTGC TGATATTTAA CGACTACCCG GTATTCAGTG GGTACGAGGA TTACATCAAG GAAGAGGCTC TAAGTCATGC CCGGCAAGAG CTTGGGCTGT ATAAGAAGCG CCTGAAGATC GAATCGCTCG GCTACAAATA CGACGAGGAT GCTTTGGCGG CCGGTGAGTA CGACGAGCTG CTTATCGACG CATAA
|
Protein sequence | MSKDADVGSK DAAAENTISF VRDGSNVKLR FEPGQQAMWA TAQNMADLFE TTADNVGLHL KNIFAVGELD EKATTEDFSV VRREGGRFVE RSIKHYNLDA ILSVGYRVNA KNAVAFRQWA TQALRTYIEQ GYVINEKALR ESPEKLNKLA AAVRALRSEE KQVYAKVREC FKICASDYDP NSKEVRSFYA LLQDKFHHAV TGMTSSKLIL DRADHHLENM GMLAIKGTNP TAEEAKTGKN YLNNEELYRL HLLSEQFMLY AESTALTKRP MTMSSLHEKL DALLIFNDYP VFSGYEDYIK EEALSHARQE LGLYKKRLKI ESLGYKYDED ALAAGEYDEL LIDA
|
| |