Gene Psyr_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2815 
Symbol 
ID3368333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3389670 
End bp3390704 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content50% 
IMG OID637653164 
Producthypothetical protein 
Protein accessionYP_235892 
Protein GI66046051 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.213356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.859247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGG ATGCAGATGT TGGTAGTAAG GATGCGGCAG CCGAAAATAC AATTTCTTTC 
GTGCGCGATG GATCAAATGT AAAGCTTAGG TTCGAGCCTG GACAGCAAGC AATGTGGGCA
ACCGCCCAAA ACATGGCAGA CCTGTTTGAG ACCACAGCAG ACAATGTCGG ACTTCACCTA
AAAAACATAT TTGCTGTTGG GGAGCTGGAT GAAAAGGCAA CTACCGAGGA TTTCTCGGTA
GTTCGAAGGG AGGGCGGCCG CTTCGTCGAA CGTAGCATAA AACACTACAA TCTGGATGCT
ATTCTCTCGG TCGGTTATCG AGTCAACGCC AAAAATGCTG TTGCGTTCCG GCAATGGGCT
ACGCAGGCTC TGCGAACCTA CATCGAGCAA GGGTATGTAA TCAACGAGAA GGCTCTGCGT
GAGTCTCCTG AAAAGCTGAA CAAACTGGCC GCCGCAGTTC GGGCGCTCCG GTCCGAAGAG
AAGCAGGTAT ACGCCAAGGT TAGAGAATGC TTCAAGATTT GCGCATCAGA TTATGACCCA
AACTCCAAGG AGGTAAGGAG CTTTTACGCC TTGTTGCAAG ACAAATTCCA CCACGCAGTC
ACAGGCATGA CCAGCTCAAA GCTGATTCTT GATCGCGCGG ACCACCATTT AGAAAATATG
GGCATGCTAG CTATAAAGGG CACAAACCCC ACGGCGGAAG AAGCGAAGAC AGGTAAGAAC
TACCTAAATA ATGAAGAGCT GTATCGTCTC CATTTGCTCT CGGAGCAGTT CATGCTTTAT
GCCGAAAGCA CCGCCCTTAC TAAGCGTCCT ATGACCATGA GTTCGCTTCA TGAAAAGCTT
GATGCTCTGC TGATATTTAA CGACTACCCG GTATTCAGTG GGTACGAGGA TTACATCAAG
GAAGAGGCTC TAAGTCATGC CCGGCAAGAG CTTGGGCTGT ATAAGAAGCG CCTGAAGATC
GAATCGCTCG GCTACAAATA CGACGAGGAT GCTTTGGCGG CCGGTGAGTA CGACGAGCTG
CTTATCGACG CATAA
 
Protein sequence
MSKDADVGSK DAAAENTISF VRDGSNVKLR FEPGQQAMWA TAQNMADLFE TTADNVGLHL 
KNIFAVGELD EKATTEDFSV VRREGGRFVE RSIKHYNLDA ILSVGYRVNA KNAVAFRQWA
TQALRTYIEQ GYVINEKALR ESPEKLNKLA AAVRALRSEE KQVYAKVREC FKICASDYDP
NSKEVRSFYA LLQDKFHHAV TGMTSSKLIL DRADHHLENM GMLAIKGTNP TAEEAKTGKN
YLNNEELYRL HLLSEQFMLY AESTALTKRP MTMSSLHEKL DALLIFNDYP VFSGYEDYIK
EEALSHARQE LGLYKKRLKI ESLGYKYDED ALAAGEYDEL LIDA