Gene Psyr_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2718 
Symbol 
ID3368235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3300251 
End bp3301435 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content62% 
IMG OID637653066 
Producthypothetical protein 
Protein accessionYP_235795 
Protein GI66045954 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.256206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGAA CGAAAATTTC CGCAGCACTG GCCATGATTT CCGCCGCCAC ACTCGCTACT 
TCGCTGGCCT ACGGCGCGAC CGCCATTCCA TTGCCTGCCA GTGCGCCTGC CGACAAACCG
ATCGGCAAGC TCGAACAGGT GCATGCCTTT TATGACGCGA TGCCTACCGG CGTGACGGTG
ACTGAAACCG GACGGATCTT CGTCAATTTC CCGCGTTGGG GTGACAAGGT GCCGTTTACT
GTGGGCGAGA TTCGTGACGG CAAAGTGGTT GCCTACCCCG ATCTGGCGGT CAACAAGGAG
AACCCCAAAG ACCCTGGCGA CGGGCTGATC AGCGTGCAGA GTGTGGTCGC CGACGGCAAG
GGTCGTGTCT GGCTTCTGGA CACGGCCGCA CCGGGCTTTG CGTCTCCGCG TCGAGGCGGC
GCCAAACTGG TTGCGGTGGA CCTGGCCACC AACCGGATCG TCAAGCGCCT GGTGTTTCCG
GATAACGTCA TCTTGCCCGG CACTTATGTC AACGACATGC GCTTTGACTT GCGCAAGGGA
GCGGAGGGGA CGGTCTATGT AACGGACTCA TCCTTGAGCG GGCCGGGCGC GATCATTGTC
ATGGACATTG CCAGCGGCCA CGCCGTGCGG CGCTTGAACG GGGCGCAGGC TACGTCTGTC
GATCCGGCTT TCGTACCCGT CGTCGAAGGT GTTGCTGTGC TGGGCGATGG CCCGAACGGA
ACGCGCAAAC CGGTCGGCGT CGCCTCGGAC GGCATTGCGT TGTCGGCAGA CGGCAAGACA
CTGTATTTCT CGCCGTTGTC CAGCCGCCAT CTGTATGCCG TGGCCACCGA GCTGTTGAAC
GACAGCAAGG TCAGCGAGCA GCAGTTGGCA GCGGCGGTGC AGGACCTCGG GGAAAAAGGC
GCTTCGGATG GCCTGGAGGC TGATGCCAAA GGCGCGGTAT ACGCAGGCGA CTACGAGCAT
AATTCGATTC GCAAACGCCT GCCGGATGGC ACCTGGCAAA CGGTGGCACA CGATCCGCGC
ATGCTGTGGC CTGACACCTT GTCGATCGGC CCGGATGGCT ACCTGTACTT CATCGTCAAC
CAGCTGCACC GCCAGGCCAA CTTCAACGCC GGCCACGACA AGCGGGAAAA ACCCTACAGC
CTGCTGCGTT TGAAAATAGA CGCTGCGCCC GCACCTACCC ATTGA
 
Protein sequence
MHRTKISAAL AMISAATLAT SLAYGATAIP LPASAPADKP IGKLEQVHAF YDAMPTGVTV 
TETGRIFVNF PRWGDKVPFT VGEIRDGKVV AYPDLAVNKE NPKDPGDGLI SVQSVVADGK
GRVWLLDTAA PGFASPRRGG AKLVAVDLAT NRIVKRLVFP DNVILPGTYV NDMRFDLRKG
AEGTVYVTDS SLSGPGAIIV MDIASGHAVR RLNGAQATSV DPAFVPVVEG VAVLGDGPNG
TRKPVGVASD GIALSADGKT LYFSPLSSRH LYAVATELLN DSKVSEQQLA AAVQDLGEKG
ASDGLEADAK GAVYAGDYEH NSIRKRLPDG TWQTVAHDPR MLWPDTLSIG PDGYLYFIVN
QLHRQANFNA GHDKREKPYS LLRLKIDAAP APTH