Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2718 |
Symbol | |
ID | 3368235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3300251 |
End bp | 3301435 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653066 |
Product | hypothetical protein |
Protein accession | YP_235795 |
Protein GI | 66045954 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.256206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGAA CGAAAATTTC CGCAGCACTG GCCATGATTT CCGCCGCCAC ACTCGCTACT TCGCTGGCCT ACGGCGCGAC CGCCATTCCA TTGCCTGCCA GTGCGCCTGC CGACAAACCG ATCGGCAAGC TCGAACAGGT GCATGCCTTT TATGACGCGA TGCCTACCGG CGTGACGGTG ACTGAAACCG GACGGATCTT CGTCAATTTC CCGCGTTGGG GTGACAAGGT GCCGTTTACT GTGGGCGAGA TTCGTGACGG CAAAGTGGTT GCCTACCCCG ATCTGGCGGT CAACAAGGAG AACCCCAAAG ACCCTGGCGA CGGGCTGATC AGCGTGCAGA GTGTGGTCGC CGACGGCAAG GGTCGTGTCT GGCTTCTGGA CACGGCCGCA CCGGGCTTTG CGTCTCCGCG TCGAGGCGGC GCCAAACTGG TTGCGGTGGA CCTGGCCACC AACCGGATCG TCAAGCGCCT GGTGTTTCCG GATAACGTCA TCTTGCCCGG CACTTATGTC AACGACATGC GCTTTGACTT GCGCAAGGGA GCGGAGGGGA CGGTCTATGT AACGGACTCA TCCTTGAGCG GGCCGGGCGC GATCATTGTC ATGGACATTG CCAGCGGCCA CGCCGTGCGG CGCTTGAACG GGGCGCAGGC TACGTCTGTC GATCCGGCTT TCGTACCCGT CGTCGAAGGT GTTGCTGTGC TGGGCGATGG CCCGAACGGA ACGCGCAAAC CGGTCGGCGT CGCCTCGGAC GGCATTGCGT TGTCGGCAGA CGGCAAGACA CTGTATTTCT CGCCGTTGTC CAGCCGCCAT CTGTATGCCG TGGCCACCGA GCTGTTGAAC GACAGCAAGG TCAGCGAGCA GCAGTTGGCA GCGGCGGTGC AGGACCTCGG GGAAAAAGGC GCTTCGGATG GCCTGGAGGC TGATGCCAAA GGCGCGGTAT ACGCAGGCGA CTACGAGCAT AATTCGATTC GCAAACGCCT GCCGGATGGC ACCTGGCAAA CGGTGGCACA CGATCCGCGC ATGCTGTGGC CTGACACCTT GTCGATCGGC CCGGATGGCT ACCTGTACTT CATCGTCAAC CAGCTGCACC GCCAGGCCAA CTTCAACGCC GGCCACGACA AGCGGGAAAA ACCCTACAGC CTGCTGCGTT TGAAAATAGA CGCTGCGCCC GCACCTACCC ATTGA
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Protein sequence | MHRTKISAAL AMISAATLAT SLAYGATAIP LPASAPADKP IGKLEQVHAF YDAMPTGVTV TETGRIFVNF PRWGDKVPFT VGEIRDGKVV AYPDLAVNKE NPKDPGDGLI SVQSVVADGK GRVWLLDTAA PGFASPRRGG AKLVAVDLAT NRIVKRLVFP DNVILPGTYV NDMRFDLRKG AEGTVYVTDS SLSGPGAIIV MDIASGHAVR RLNGAQATSV DPAFVPVVEG VAVLGDGPNG TRKPVGVASD GIALSADGKT LYFSPLSSRH LYAVATELLN DSKVSEQQLA AAVQDLGEKG ASDGLEADAK GAVYAGDYEH NSIRKRLPDG TWQTVAHDPR MLWPDTLSIG PDGYLYFIVN QLHRQANFNA GHDKREKPYS LLRLKIDAAP APTH
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