Gene Psyr_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2676 
Symbol 
ID3368193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand+ 
Start bp3247353 
End bp3248369 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content63% 
IMG OID637653024 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 
Protein accessionYP_235753 
Protein GI66045912 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0177181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.903011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CTGCCCACCT CACAGAAAAC GGCGACGGCA CGGTGCTCAG CATCAGCGAC 
CTGACCGTAC GCTTTGCCGG TGCGCCCGCC AATGTTGTCG ACGGCGTGTC GTTTTCCGTC 
AAGCGTGGCA AGACCCTGGC CATCGTCGGC GAGTCCGGCT GCGGCAAAAG CGTAACATCG 
ATGGGCCTGA TGGGCCTGTT GCCGTCAACG GCCAGGGTCG GCGCGAGCGA CTCGCTGCTG 
ATCGATGAAG CCTTGCTGGG CATGTCCGAA GGGCGCCTGC TGGACGTGCG CGGTAACCGC 
ATGGCGATGA TCTTCCAGGA GCCGATGACC TCCCTCAATC CAGTCTTCAC CATCGGCGAG 
CAGATCGCTG AAAGTGTGAT GCGTCATCAG GGCCTTTCCG ACAAGGCAGC CCGCCAGCGC 
GCTCTGGAGA TGCTGGAAAA GGTCCGCGTG CCGGACGCTC GCCAGCGGCT GGACGCCTAC 
CCGCATGAAC TTTCGGGTGG CATGCGGCAA CGGGCCATTA TTGCCATGGC GCTGGCCAAT 
GACCCGGCGC TGATCATTGC CGACGAACCG ACCACCGCGC TGGACGTGAC CATTCAGGCG 
CAAATCCTTT CGCTGATCGC CAACCTGCAG ACCGAGACCG GCACGGCGAT GATTCTGATC 
ACCCACGATT TGGGTGTAGT CGCCGAAGTC GCCGATGAGG TCATGGTCAT GTACGCCGGA 
CGCGTCGTGG AAAGCGGCCC GGTGAAAACC CTGTTCGACG ATCCGCAACA TCCATACACC 
ATCGGCCTGA TGGGCTCGAT GCCCTCGATC GGCCCTCGTG AAGGCCGCCT GGCAACGATT 
AACGGTCGGG TGCCGACACC GGCAGAAATG CCCAGCGGTT GCCGCTTCGC CGGGCGCTGC 
CCGTTCGTGA TCCAGCAATG CCGAGACGAA CGCCCGCCGC TGCTTGAGTT GTCTCCCGGA 
CACTTCGCCG CGTGCATCCG GGCGCCTTTG GAACAGCATG TGGGAGTCAG TGCGTGA
 
Protein sequence
MSATAHLTEN GDGTVLSISD LTVRFAGAPA NVVDGVSFSV KRGKTLAIVG ESGCGKSVTS 
MGLMGLLPST ARVGASDSLL IDEALLGMSE GRLLDVRGNR MAMIFQEPMT SLNPVFTIGE 
QIAESVMRHQ GLSDKAARQR ALEMLEKVRV PDARQRLDAY PHELSGGMRQ RAIIAMALAN 
DPALIIADEP TTALDVTIQA QILSLIANLQ TETGTAMILI THDLGVVAEV ADEVMVMYAG 
RVVESGPVKT LFDDPQHPYT IGLMGSMPSI GPREGRLATI NGRVPTPAEM PSGCRFAGRC 
PFVIQQCRDE RPPLLELSPG HFAACIRAPL EQHVGVSA