| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2632 |
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| Symbol | |
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| ID | 3368149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3194740 |
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| End bp | 3197874 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652980 |
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| Product | virulence protein SrfB |
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| Protein accession | YP_235709 |
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| Protein GI | 66045868 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4457] Uncharacterized protein conserved in bacteria, putative virulence factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.623195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCAG AACTGACGCA ATTTGAAGAC ACCGTTCACC TGATCAATGA CAGCGGAATC
CAGTTTCTGG ACTTCGCCGT CAAACTTGAT CTGCGTAACG AGCCTGCCGG ACGTTTCGCG
AAAATGGGCA ATACGCTCAT CGCGCGTCTG CTGCAGAACC AGGAAACCAA GCAGTACTTC
CACTTCGGGC CGGTGGGCAC CGCCAACCAG TCCGGTGAGC GGTTGGCGCA ATCGCAGGCT
CAGGAACGCC TGGTCAGCGA AGTCGATGAC GAAGACCTCA CGCTGGGCAT GCAGTCCAGT
TTCAAATTGC TGGATGGCCT ATGGATGCCA GCACCGGTGT TTCGTTTTTT GCCGCCAGAG
CGTTACGACG AAGGTCCGAC CAATTGGGCA CGTGTTCGTC TGATCGAGCT TGAACAGCCT
GATGTCGATG GCAACACCCA CCGCCTGACA CTGGCATTCG ACACGCGTGC GATGGCGTCG
GCGACGGGCA TGCAATACCT GGCACCGACC CGGGACGACA TAAATGCCGG CTCGTCCTTC
CGCCTGGCGT GCCACGCGCG TCAGAGCCGC TGGTTTCTGG ACCAGAAATG GGTGCAGGAC
TGGTTGGCGG AAATCTATCG TGAAGGCAAC CGGCATCGCC CCAGCGAAGA TGTTGAAGAA
GAGTTGGTCG AGCAGCGGCA TATCGGCCAC TACCTCAACC TGCTGAGCCT CATGGCCAAG
CCTATTCCTG AGCAGCGCAG CAGTGAACCG GCACGCGTTG TCGTCCCGGA AATAAAGCTG
GCCGCCAATG GCGCAGACTC CATAGACCTG CCGATTCAGG TGGATCTGGT GCTGGACGTA
GGCAACTCGC GTACCTGCGG CATTCTGATC GAGAACCACG GGCAGTCCGG CGATGGGATG
AAGCACAACT ACATCCTGCA GATTCGCGAT CTGGTCAACC CTGAGCGGGT CTACAGCCAG
CCGTTCGAAA GCCGCGTGGA GTTTGCCCAG GCGTCGTTCG GCAAGGAAAA CTTCTCGGTC
CAGAGTGGCC GGCATGATGC GTTTCAGTGG CCGACGATTG CTCGTGTCGG CGTCGAAGCC
GGGCGGTTGT CTGGCCGTCG GCGTGGTACT GAGGGCTCTA CCGGCCTGTC GAGTCCCAAA
CGCTATCTGT GGGACGAAAA CGCCTACACC CACGGTTGGC GATTCAACAA TTCCTACGTG
CAGACCGACA GCGAGCCCAA AGCTACTGCC GCACCGTTCT CGCACAAGAT CACCAAACTC
GGCCAGGCGT TTTACAAACT CAAGAATGAG GACGACCGCC TGCCTGCGTT CTCCCCGCAA
TACTCGCGCA GCTCGCTGAT GACCTTCATG CTCGCCGAGG TGCTGACGCA AGCGCTGTTG
CAAATCAACA GCCCGGCACA ACGCACGCGC ATGGGGCACA CCCAACGCCC TCGTCAGTTG
TCCAGCATCA TCCTGACAGT ACCGCCGGGA ATGCCGCAGG TAGAACGCAG CCTGCTAAAC
GACCGGCTGC TTCAGGCGCT GGCGCTGGTC TGGAAATGCA TGGGGTGGCA CGAAGGTGAC
CTCGACCCGA GTAAAGCCAA GGGGCTGAAT TCGCCAGTAC CCGCGCCTCG TGTGCCGCTG
CCGCGCATAA AAGTGGAGTG GGATGAAGCG ACGTGCGGTC AGCTCGTCTA CCTGTACACC
GAGATTCGCG AAAACTTTGC CGGCCATGCA CAAGAGTTCT TCGACACGCT GGCACGCCCG
GAAAAGGCCA ATCGCGAACA CCTGACGCTG GCGACTATCG ATATTGGCGG CGGCACCACC
GACCTGGTCA TTACGGATTA CTCACTGGAA CGCGGTGCAG AACAGGCCAG CGGAAGCAAC
GTTTCGATCA TCCCCGAGCA GCGCTTTCGT GACAGCTTCA AGGTCGCTGG CGATGACATC
TTGCTGGACA TCATCCAGCG GTTCGTATTG CCTGCCTTGG AACAAGCGCT CAGGGATTTT
GGTGTGGTTT CACCGCGCTC GCTCCTGTCG CGACTGTGCG GCGACGAAAG CACCAGCGCT
CAGGAAGCCA TCCTGCGCCA ACAGCTCAAC CTGCAAGTGT TCGTGCCACT GGGCCTGCGC
TTGCTCAAGG ACTACGAAAC TTACGACCCT GAATTGCCAA GCCCGGTTCA CGACTACCTC
TTTGCTGATT TGCTGGAAAG AGATGCGATC AGTGAACGTA TTCGCGAATA CGTGGCCGGT
GGCGTTCGAC GCATTGATGG TGGCCGTGAT GGCTTCGAGC TGGGTCAGGT CGTGCTGCGT
ATCGATCTGC CTGCCATTCA TCGGGCGTTC CTCAAAGGCC AGATCAACCT GAGCAAGATC
CTTGATGCAT TGTGCGAAGT GGTCTTCCAG TACCCTTGCG ACGCGCTGCT GCTGACCGGC
CGCCCTTCGC GCCTGCCAGG CGTGCAGGCT TATATACGCC GCAAAGTGCC GCTGCCACCA
GGGCGCATCG TGCCCATGAA CGGTTATCGT ACCGGCGGGT GGTACCCCTT CCACCGCAAT
GGCCAGATTG ACGATCCCAA GAGCACGGCT GCGGTCGGCG CGATGCTATG CCTGCTCAGC
GAGCAGCGCA AAGTGTCGAA CTTCTATTTC AGTGTTGGCC GGCTCAAGCC GTATTCGACC
ATGCGCCATA TCGGCAAACT GGACGAAAAC AATCTTGTCA TCGATCACGA CATGCTTTAT
CGCGATGTGA TCAAAAGCGA CGCGCAAGGC AACGAATTCC TGCAATTGCA CGAGCCGCAA
CTCGACGGGC CGCAGTTGCG GGTGCTGGGT AAAACCCGCC TGGGCTATCG ACAGCTCAAC
GCCGAGCGTT GGGTCGCGGC GCCCTTGTAT CTGATCGAAC TCACCGAGCG CGGCACGCGA
AAACTGGTCG GCAAACCGAC CAAGGACGGC AAGGAAGCCT GCCTGTTGCT GCGTTTTCGC
GTCGATGGCG CAGATGCCGA CCGTGGCGAT GCAGAGATCA TCGCCGAAAC CCTGGTGATC
GACGACAACA TCGAAAGCAA CACCGGCGAG TCCTTTGATC GCAAGGACGT GAAACTACAG
CTCTACACCA TGCTGAGCGC CGAAGGTGGT GCCTCCAACT ATTGGCTCGA CAGCGGGAGC
GTGAGTCCGA AATGA
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| Protein sequence | MLPELTQFED TVHLINDSGI QFLDFAVKLD LRNEPAGRFA KMGNTLIARL LQNQETKQYF
HFGPVGTANQ SGERLAQSQA QERLVSEVDD EDLTLGMQSS FKLLDGLWMP APVFRFLPPE
RYDEGPTNWA RVRLIELEQP DVDGNTHRLT LAFDTRAMAS ATGMQYLAPT RDDINAGSSF
RLACHARQSR WFLDQKWVQD WLAEIYREGN RHRPSEDVEE ELVEQRHIGH YLNLLSLMAK
PIPEQRSSEP ARVVVPEIKL AANGADSIDL PIQVDLVLDV GNSRTCGILI ENHGQSGDGM
KHNYILQIRD LVNPERVYSQ PFESRVEFAQ ASFGKENFSV QSGRHDAFQW PTIARVGVEA
GRLSGRRRGT EGSTGLSSPK RYLWDENAYT HGWRFNNSYV QTDSEPKATA APFSHKITKL
GQAFYKLKNE DDRLPAFSPQ YSRSSLMTFM LAEVLTQALL QINSPAQRTR MGHTQRPRQL
SSIILTVPPG MPQVERSLLN DRLLQALALV WKCMGWHEGD LDPSKAKGLN SPVPAPRVPL
PRIKVEWDEA TCGQLVYLYT EIRENFAGHA QEFFDTLARP EKANREHLTL ATIDIGGGTT
DLVITDYSLE RGAEQASGSN VSIIPEQRFR DSFKVAGDDI LLDIIQRFVL PALEQALRDF
GVVSPRSLLS RLCGDESTSA QEAILRQQLN LQVFVPLGLR LLKDYETYDP ELPSPVHDYL
FADLLERDAI SERIREYVAG GVRRIDGGRD GFELGQVVLR IDLPAIHRAF LKGQINLSKI
LDALCEVVFQ YPCDALLLTG RPSRLPGVQA YIRRKVPLPP GRIVPMNGYR TGGWYPFHRN
GQIDDPKSTA AVGAMLCLLS EQRKVSNFYF SVGRLKPYST MRHIGKLDEN NLVIDHDMLY
RDVIKSDAQG NEFLQLHEPQ LDGPQLRVLG KTRLGYRQLN AERWVAAPLY LIELTERGTR
KLVGKPTKDG KEACLLLRFR VDGADADRGD AEIIAETLVI DDNIESNTGE SFDRKDVKLQ
LYTMLSAEGG ASNYWLDSGS VSPK
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