| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2586 |
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| Symbol | |
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| ID | 3368103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3030855 |
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| End bp | 3032261 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637652934 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_235663 |
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| Protein GI | 66045822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.941296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00272882 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTCA ACGTCCCACG TAGCTGGGTA GTGGTCAACG TGCTGCTCGG TACGCTGACG
GTCAGTCTGA GCAACAGTTC GCTCAACCCG GCGCTGCCTG CCTTCATGGA GGCGTTCAGG
ATCGGGCCGC TGCTGGCCAC CTGGATCGTC GCCGGATTCA TGACCAGCAT GGGCATGACC
ATGCCGCTGA CCAGCTTCCT CAGTCAGCGC ATCGGACGCA AACGCCTGTA CCTGTGGGGT
GTGGCGCTGT TCATTGGCGG CTCGCTGCTG GGCGCGCTGG CCGACTCCAT CGCGCTGGTG
ATCACCGCAC GGGTGGTGCA GGGCATTGCC AGCGGGCTGA TGATCCCCTT GTCGCTGGCG
ATCATCTTTT CGGTGTATGA AAAGCACGAA CGGGGCAGGG TGACCGGGCT CTGGAGCGCA
GCAGTGATGC TCGCACCGGC GCTCGGTCCG CTGTGCGGCA GCCTGATGCT GGAGTGGTTC
AGCTGGCGCT CGCTGTTCCT GATGAATGTG CCCATCGGCC TGCTGGCGCT GTTGCTGGGC
GTCGGCGTGC TGCCGGACGC CGAGCCCGCC GAGCGCAAGC CGTTCGATTT GATCGGCTAC
CTGCTGGTGG CCTCGGGCAT CGGCTTGCTG ATGATCGCCA TTAGCCGCAT GCACCATGCT
CAGGCGCTGC TCGATCCAGT CAATCAGGCC ATGGTGCTGG TCGCATTGGC CTGTCTGGTG
GCATTCGTCC GGGTCGAGCT GAGTCGCCAG GCTCCGCTGC TGAATCTGCG TCTGTTCAAC
CTGCGCGGTT ATCGTCTGAG CGTGATCATC GCCGTGGTGC AATCGGTCGG CATGTTCGAG
TGCCTGGTGT TGCTGCCGCT GCTGGTGCAG AACGTGCTGG GCTACAACCC GATCTGGACC
GGCCTGGCGC TGCTGTGTAC CGCCAGCTTC GCGAGCCTGT TCGGGCAGTG GGGCGGCAAG
GCGCTGGATC GCCATGGCCC ACGCACCGTC GTCGCCATCG GCCTGCTGCT GACCGGCGTT
TCGACCCTGG CGCTGGGCAT GCTCAAGGCC GACGCCGCGA TCGGCGTGGT GTTCGTCCTG
ATGATGATTC GTGGCGCCGG CCTCGGGCTC TCCTATATGC CGGTGACTAC GGCGGGGCTC
AATGCCTTGC CCGAGCCGAT GGTCACTCAG GGCGCCGCGA TGAACAACAT TTCGCGCCGT
CTGGTCGCGT CGCTGGCCAT CGTCATCGCC TCGCTGTGGC TGGAGTTCCG CCTCAACACC
GCGGGCCCGG CCGCCACGCC CTCGGCCATC AGCGAAGTAT TCATCGCCAC CGGCGTGCTG
ATCCTGCTGG CACTGCCGTG TGCCTGGCGT TTTCCCCTTA ACGACGAGCG CGCCGAGGCC
CAGCCCGACG CGGTCGAACC CCGATAA
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| Protein sequence | MSFNVPRSWV VVNVLLGTLT VSLSNSSLNP ALPAFMEAFR IGPLLATWIV AGFMTSMGMT
MPLTSFLSQR IGRKRLYLWG VALFIGGSLL GALADSIALV ITARVVQGIA SGLMIPLSLA
IIFSVYEKHE RGRVTGLWSA AVMLAPALGP LCGSLMLEWF SWRSLFLMNV PIGLLALLLG
VGVLPDAEPA ERKPFDLIGY LLVASGIGLL MIAISRMHHA QALLDPVNQA MVLVALACLV
AFVRVELSRQ APLLNLRLFN LRGYRLSVII AVVQSVGMFE CLVLLPLLVQ NVLGYNPIWT
GLALLCTASF ASLFGQWGGK ALDRHGPRTV VAIGLLLTGV STLALGMLKA DAAIGVVFVL
MMIRGAGLGL SYMPVTTAGL NALPEPMVTQ GAAMNNISRR LVASLAIVIA SLWLEFRLNT
AGPAATPSAI SEVFIATGVL ILLALPCAWR FPLNDERAEA QPDAVEPR
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