| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2574 |
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| Symbol | |
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| ID | 3368091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2988178 |
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| End bp | 2990553 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652922 |
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| Product | quinoprotein |
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| Protein accession | YP_235651 |
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| Protein GI | 66045810 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCA AAGTGACCGG TATCGTCATC GCGATACTCA GCCTCATTCT GCTATTCATG
GGGGCGCAAC TGGTGGCTGC CGGCGGTTCA CCGGCCTACT CGATGATCGC CCTGGGTTTG
CTGGCCACAG CAACCCTGGT ATTCCTGAAA AGAAAGTCGG CACTTACCCT GTATGCGGTG
ATGATGTGGG GGATTCTGCT CTGGATCATC TATGAAGCGG GCCTGGACAA ATGGCAGTGG
ATCCCTCGCG GCGATCTGTT TGCACTGATC GGCCTGTGGC TGGCCATGCC CTGGGTCGTG
CGGCCGCTTT ATCAAGCGCG GTCGAGCACC GATAAGCGTC GTTTTCATCC GTTGCTGGGC
GGTACGCTTG GCGTAATGCT GCTGATCGTG ATTGCGCTGA TGTTTCACGA TCCGTACCCG
CAGCAAGGGC GGATCGACAG CGTGGCGACC GCCCGCAGCG CCGAGTCGGC AGGCAGTGAC
TGGGCTGCAT ATGGCGGTAG CAACGCGGGC CAGCGCTTTT CCAGCCTCGA TCAGATCACC
CCGGACAACG TCGGCAAGCT GTCGGTGGCC TGGGAATACC ACACCGGTGA CTTGCGCGAT
GAAGACGAGG ATGCCGGCGA GTACACCTTT GAAGCGACGC CCCTCAAGAT CAACGACCGG
GTGTATGTGT GCACGCCTCA TAACGAAGTG CATGCGCTGA ACCCGCAGAC CGGGCAACTG
GCCTGGAAAT ACACCCCCGA GAAAAAACGC TCGTATTTGC AGCAGCACCA GACCTGCCGT
GGCGTCAGCT ACTATTCGGC AGCCTCCAGC CCGACAGGCC AGCCACAACA GCCCGCTCAA
TGCGCCAAAC GCATCATCAC CGCGACTGCA GATGCCAGGC TGGTAGCGCT TGATGCCGAC
AGCGGCAACC TGTGCAGCGA CTTCGGCAGC GGCGGGGTGA TCGACTTGAG CTTCAACATG
GGCACGATCC GCCCGCACGC GCTGATGCAG ACATCCGCGC CACTGATTGC AGGCGATCTG
ATAGTGATCG GCAGCTCGAT CATGGATAAC GGTTATAACG ACGGCAACCC GTCGGGTGTG
ATTCGCGCCT ACGACGTCAT CACCGGCAGG CTGGTATGGA ATTTCGATCC GCAAAACCCG
GACAACACCC AGCCTATAGC GGCTGACCAG AGCTATCCGC AGGACACGCC GGTCGCCTGG
GCAACCCTGA GCGCTGATGT CAAAAACGGT CTGGTGTACG TCCCGTTCGG CAACGCTTCG
CCCGACGAAA CCGGCACCCG GCGTAACCCC GACAGCAACA CCGAGAAGTT TCGCGATGCA
CTGGTGGCTC TCGACCTGAA GAGCGGCGCG CTGCGCTGGA AATTCCAGAC CTCGAACAAT
GACCTTTGGG ATCGCGACAA CCCATCGCAG CCCTCACTGC TGGATCTGGG AAAAGACGGT
AGCCGCCAGC CTGCCCTGGT GTTGCCGACC AAAGTAGGCA ACATCTTTGT GCTTGACCGA
CTGACGGGCG AGCCGATCGT GCCTGTCGAT CAGGTCAGTG TGCGCACCGC GGGCGGTGTT
GAAGGCGAGC GCTTTGCACC CACCCAGCCG GTCTCGCGAC TTAACTTCAT CCCGCCGGTG
TTGACCGAGA AGTCCATGTG GGGCGTTACG CCTTTTGACC AGATGGCTTG CCGGATCGCG
TACAACACCC TTCGTTATGA CGGTAACCCT TGGACACCGG CCACCGAGTC GGGATCGCTG
ATCTATCCCG GCAACATAGG CGTGTTCAAC TGGGGTTCGG TGGCCGTGGA CCCTGACCGC
CAGTTGCTGA TCACCGCACC GGTGCGCCTG GCGTATGTCT ACAACCTGAT CAAGCGCCCC
GCGCAGGCCC GGGAAAAACG CCTGTTCACT CAGGAGGGCA AGCCCTACTG GAACGAGAAC
TTCGACGGTG ACTATGCCAT CCGTATTTCC AGATTCGCCT CGAGCCTTGG CATTCCGTGC
ACAGCGCCAC CGTGGGGGAC CATGGCCGGG GTCGATCTGA CGACCGGCAA GACCCAATGG
ATGCGCCGGG TTGGTACCAC CAAAAACCTC AAGACCAGCT TCATGCAGGG ACGTTTTCCG
GTCGGTTTTC CCATGGGCAT GGTCGCCCAT GGCGGTCCGA TGGTGACGGC AGGCGGATTG
GCCTTTCACG GCGCGACGGC GGATAACTTT TTCCGCGCCT ACGACGTCAA TAGCGGCGAA
GTGCTCTGGG AACACGAGTT ACCCGCGGGT GGCCAATCGA TTCCTTCGAC GTATACCGGC
AACGACGGCA AACAGTACGT GGTCATTGCT GCCGGCGGTC ACGGATCGCT CGGTACGACG
TTGGGCGACA GCGTGATTGC CTTCCGGGTT GATTGA
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| Protein sequence | MILKVTGIVI AILSLILLFM GAQLVAAGGS PAYSMIALGL LATATLVFLK RKSALTLYAV
MMWGILLWII YEAGLDKWQW IPRGDLFALI GLWLAMPWVV RPLYQARSST DKRRFHPLLG
GTLGVMLLIV IALMFHDPYP QQGRIDSVAT ARSAESAGSD WAAYGGSNAG QRFSSLDQIT
PDNVGKLSVA WEYHTGDLRD EDEDAGEYTF EATPLKINDR VYVCTPHNEV HALNPQTGQL
AWKYTPEKKR SYLQQHQTCR GVSYYSAASS PTGQPQQPAQ CAKRIITATA DARLVALDAD
SGNLCSDFGS GGVIDLSFNM GTIRPHALMQ TSAPLIAGDL IVIGSSIMDN GYNDGNPSGV
IRAYDVITGR LVWNFDPQNP DNTQPIAADQ SYPQDTPVAW ATLSADVKNG LVYVPFGNAS
PDETGTRRNP DSNTEKFRDA LVALDLKSGA LRWKFQTSNN DLWDRDNPSQ PSLLDLGKDG
SRQPALVLPT KVGNIFVLDR LTGEPIVPVD QVSVRTAGGV EGERFAPTQP VSRLNFIPPV
LTEKSMWGVT PFDQMACRIA YNTLRYDGNP WTPATESGSL IYPGNIGVFN WGSVAVDPDR
QLLITAPVRL AYVYNLIKRP AQAREKRLFT QEGKPYWNEN FDGDYAIRIS RFASSLGIPC
TAPPWGTMAG VDLTTGKTQW MRRVGTTKNL KTSFMQGRFP VGFPMGMVAH GGPMVTAGGL
AFHGATADNF FRAYDVNSGE VLWEHELPAG GQSIPSTYTG NDGKQYVVIA AGGHGSLGTT
LGDSVIAFRV D
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