Gene Psyr_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2565 
Symbol 
ID3368082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2978988 
End bp2979650 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID637652913 
ProductDak phosphatase 
Protein accessionYP_235642 
Protein GI66045801 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC AATTCTCTAC GCATCTCCCT GCACAACAGG GCACTCCTAT CGTTGCCGAC 
CTGGTGAGCG TGATCGTCGC CAACCGCGAC TACCTCAGCG AAGTGGATGG CGCGATCGGT
GACGGCGACC ATGGCATCAA CATGGCCAAG GGCTTCGCCC ACTGTGGTCG TACCATCGAA
GGCCGCCAAC TGAGCCTCGC CGAAGCGCTG GACGAACTGA CCCTGAGCCT GATGGAAGGC
ATCGGCGGCT CGATGGGCCC GCTGTACGGC AGTCTGTTCA TCGGCATGGC CGATCAGGTG
CGCGGCTGCG AACAGATCGA CGCCGCGGCC TTCGCCAGCC TGCTGCGCGG CGGTCTCACC
TCACTGCAGG ACATCACCGA AGCCGGGGTC GGCGACAAAT GCTTGATGGA TACCTTGATT
CCGGCCGTCG AAGCCTTCGA GCAGGCCCAC GCCCGGGGTG AATCGTTCAG CGCAGCGCTC
GATGCGATGA AAAGCGCCGC ATCACAAGGG CGCGACTCCA CCCGTGATCT GGTGGCGAAG
ATAGGCCGGG CGAGTCGCCT CGGCGAACGG TCGCTCGGCG TGCTGGATGC AGGCGCGGTG
TCGTGCTGCC TGATACTGAC GCAACTGGCG GATTCGGTGC AGCCGAGGCT GACAGACAGC
TAA
 
Protein sequence
MSEQFSTHLP AQQGTPIVAD LVSVIVANRD YLSEVDGAIG DGDHGINMAK GFAHCGRTIE 
GRQLSLAEAL DELTLSLMEG IGGSMGPLYG SLFIGMADQV RGCEQIDAAA FASLLRGGLT
SLQDITEAGV GDKCLMDTLI PAVEAFEQAH ARGESFSAAL DAMKSAASQG RDSTRDLVAK
IGRASRLGER SLGVLDAGAV SCCLILTQLA DSVQPRLTDS