| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2533 |
|---|
| Symbol | |
|---|
| ID | 3368050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2945093 |
|---|
| End bp | 2948140 |
|---|
| Gene Length | 3048 bp |
|---|
| Protein Length | 1015 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637652881 |
|---|
| Product | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal |
|---|
| Protein accession | YP_235610 |
|---|
| Protein GI | 66045769 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.799372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGC TGCTGAAACC GACCTCTGAG CAGATCGGTC ACTATGACCG TTTCCTCAAT
GCCCTGGCGG AGGCCGGCTT TCGTGGCGAA ATAGCCCGTG ACCACGGTTC GCGCACCGTA
CTGGCCACTG ACAACTCCAT CTACCAGCGC CTGCCACAGG CTGCCGTGTT CCCGATGGAC
AGCCATGACG TCGCAATCGT CGCCCGGCTG GCGGCGCGGC CCGAGCACCA ACAGGTGGTG
TTGACCCCGC GTGGTGGCGG CACCGGGACC AACGGACAAT CACTGACCGA CGGGGTGGTG
GTCGACCTGT CGCGGCACAT GAACGCTATT CTCGAGATCA ACGTCGAGGA ACGTTGGGTG
CGCGTGCAGA CCGGTGTGGT CAAGGACCAG CTCAATGCCG CGCTCAAGCC GCACGGGCTG
TTTTTCGCGC CGGAACTGTC GACTTCCAAC CGCGCCACGA TTGGCGGCAT GATCAACACC
GATGCCAGCG GGCAGGGTAG TTGCACCTAC GGCAAGACCC GTGATCACGT CCTTGAGCTA
TCGACCGTGT TGCTGGGCGG TTCGTACGTC AACAGTCATG CACTGAATGT CGAACAACTG
GCCAGCGAGC AGGCACGCGT CGACCGCGCC GGGGACGTTT ATCGTTGCGC GCAGCAGATT
GCCGATACAA AGGCACAATT GATCAAGGAT GTTTTCCCAC CGCTTAACCG CTGTCTGACC
GGTTACGATC TGGCGCACCT GCGCGAGGAA GATGGGCGTT TCAACCTCAA CAGCGTGCTC
TGCGGTTCTG AAGGCTCGCT GGGTTTTATC GTCGAGGCCC GACTCAACGT CTTGCCGATC
CCCAAACATT CGATTCTGGT CAACGTTCGC TATGCCGGTT TCATGGACGC CCTGCGGGAC
GCCAAGGCCT TGATGGCGCA CAAGCCGCTG TCCATCGAGA CCGTGGACTC CAAGGTGCTG
ATGCTGGCCA TGCAGGATAT CGTCTGGCAT GGCGTGGCCG AGTATTTCCC CCAGGACCCT
GCAACGCCGA CGCTGGGCAT CAACCTGATC GAATTCAGCG GCGATGAGTT GAGTGAAGTG
GAGCAGCGCG TTCATGCGTT CGTTGCGCAC TTGCAGACTG ACACGTCGGT GCTGCGTCTC
GGCCACACGC TGGCGGCTGG CAGTGCGGCA GTGAATCGCG TCTACACCAT GCGCAAGCGC
TCGGTGGGGC TGCTCGGCAA CGTCAAGGGT GAAGCCAGGC CGCAGCCGTT TGTCGAAGAC
ACTGCCGTGC CGCCGGAAAA TCTTGCCGAT TACATTCAGG AGTTCCGTGC GCTGCTGGAC
AGCCACGGCC TGCAATACGG CATGTTCGGC CATGTGGATG CCGGCGTGCT GCACGTGCGG
CCGATTCTGG ACATGAAGGA CCCCGCGCAG GCTGCGCTGA TTCGGCCGAT TTCCGACGCA
GTCGCGGCGC TGACCAAGCG TTATGGCGGG CTGCTGTGGG GTGAGCATGG CAAGGGTCTG
CGTTCGCAAT ACGTGCCTGA ATATTTCGGC GAGTTGTATC CCGCGTTGCA GGCCCTCAAG
GCCGCCTGCG ACCCGTTCAA CCAGCTTAAC CCCGGCAAGA TCGCCACGCC TGCCACAGTG
CCCGACGCGC GCCTGACGCT GGTGGATGAA GTGACGTTGC GTGGCGATCT GGATCGTACG
ATCGATGAAC GGGTCTGGCA AAGCTACGAC AGCGCGTTGC ACTGCAATGG CAATGGCGCC
TGTTACAACT ATGACACCGA CGACGCCATG TGCCCGTCAT GGAAAGCCAC CCGTGACCGC
ATTCACTCAC CCAAGGGCCG CGCTTCGCTG GTCAGGGAAT GGCTGCGTCT GCAAGGCGAG
CAGGACGTCA ATGTCCTCAC CGCCAGCGCC AGGGCGCGCA GTGCCAATGT GCTGAAAAGC
CTTGCCGAGC GAACCGTCAA CAGTGTCGCC AGGGTGGCGG GGCAGAAGGA TTTCTCCCAC
GAAGTCTACG ACGCCATGGC CGGTTGCCTG GCCTGCAAGT CCTGTGCGGG ACAGTGCCCG
GTGAAAGTCA ATGTGCCCGA GTTCCGTTCG CGCTTTCTCG AGCTGTACCA CAGCCGCTAC
CTGCGCCCGA TCAAGGATTA TCTGATTGGC TCGCTGGAGT TCAGCATTCC GCACCTGGCG
CGCTTTCCGA AGCTGTACAA CGCGATCATG GGCGCAAGGC CGGTGCGTTA CCTGCTCGAA
CATGTGGCCG GCATGGTCGA CAGCCCGTTA TTGAGCTTGA CCGACTTCCG TGCGGCTTGT
GCTCGCTGGA ATGTGGGCAT CGCCACGCCG CAGCGTCTGG CCGCATCGAG CGAGGAGGAG
CGCAAGCGCA CGGTGGTGCT GGTTCAGGAT GCATTCACCC GATACTTCGA AACCCCGCTG
GCGGCAGACT GGCTGGAGCT GATTTCACGT CTCGGTTATC AGGTCTACCT CGCACCGTTT
GCGCCCAATG GCAAGCCGCT GCAGGTGCAG GGTTTTCTGC AGGCGTTCGA GAAAGCTGCC
GGTTTCAACA GTCAGTCGCT GGGCAAGCTG GCCGGGTACG GCATCCCGCT GATCGGTCTG
GACCCGGCCA TGACCCTGGT TTACCGCCAG GAGTACAGCA AGACGCTGGG CAGCGAGAAT
GTGCCCGAGG TCATGCTGCC GCAGGAATGG CTGGCGTCCA CAGTCGAGGA AGGTGGTGAT
GGCGCGTCGG CAGAAACGTA CTACTTCCTG CCGCATTGCA CTGAAAAGAC CAACGAGCCC
GCCAGCGTCG GCCTCTGGCA GAAAGCCTTT GCCCGCGCCG GGCTCAAGCT GGAGGTGCTG
GCCAGTGGTT GCTGCGGCAT GTCCGGCACC TATGGGCATG AAACCCGAAA CGCGAAAACC
AGCGATACCA TCTACCGTCA GTCCTGGCAG CCACTGGTGG CGCGGCACGG CGGTGAAGGT
CGACTGGTCG CCGATGGCTA CTCATGCCGC AGCCAGGTCA AGCGCCAGGA TGGCAAGGTG
GTGCAGCATC CATTACAGGT ACTGCTGGAA CGGGTGAGGG CGCTATAA
|
|---|
| Protein sequence | MIALLKPTSE QIGHYDRFLN ALAEAGFRGE IARDHGSRTV LATDNSIYQR LPQAAVFPMD
SHDVAIVARL AARPEHQQVV LTPRGGGTGT NGQSLTDGVV VDLSRHMNAI LEINVEERWV
RVQTGVVKDQ LNAALKPHGL FFAPELSTSN RATIGGMINT DASGQGSCTY GKTRDHVLEL
STVLLGGSYV NSHALNVEQL ASEQARVDRA GDVYRCAQQI ADTKAQLIKD VFPPLNRCLT
GYDLAHLREE DGRFNLNSVL CGSEGSLGFI VEARLNVLPI PKHSILVNVR YAGFMDALRD
AKALMAHKPL SIETVDSKVL MLAMQDIVWH GVAEYFPQDP ATPTLGINLI EFSGDELSEV
EQRVHAFVAH LQTDTSVLRL GHTLAAGSAA VNRVYTMRKR SVGLLGNVKG EARPQPFVED
TAVPPENLAD YIQEFRALLD SHGLQYGMFG HVDAGVLHVR PILDMKDPAQ AALIRPISDA
VAALTKRYGG LLWGEHGKGL RSQYVPEYFG ELYPALQALK AACDPFNQLN PGKIATPATV
PDARLTLVDE VTLRGDLDRT IDERVWQSYD SALHCNGNGA CYNYDTDDAM CPSWKATRDR
IHSPKGRASL VREWLRLQGE QDVNVLTASA RARSANVLKS LAERTVNSVA RVAGQKDFSH
EVYDAMAGCL ACKSCAGQCP VKVNVPEFRS RFLELYHSRY LRPIKDYLIG SLEFSIPHLA
RFPKLYNAIM GARPVRYLLE HVAGMVDSPL LSLTDFRAAC ARWNVGIATP QRLAASSEEE
RKRTVVLVQD AFTRYFETPL AADWLELISR LGYQVYLAPF APNGKPLQVQ GFLQAFEKAA
GFNSQSLGKL AGYGIPLIGL DPAMTLVYRQ EYSKTLGSEN VPEVMLPQEW LASTVEEGGD
GASAETYYFL PHCTEKTNEP ASVGLWQKAF ARAGLKLEVL ASGCCGMSGT YGHETRNAKT
SDTIYRQSWQ PLVARHGGEG RLVADGYSCR SQVKRQDGKV VQHPLQVLLE RVRAL
|
|---|
| |