Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2470 |
Symbol | |
ID | 3367987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2863272 |
End bp | 2864435 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652818 |
Product | isovaleryl-CoA dehydrogenase |
Protein accession | YP_235547 |
Protein GI | 66045706 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0293728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0125727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACC CCAGCCTGAA CTTCGCACTT GGCGAAACCA TCGACATGCT GCGCGACCAG CTGCAATCCT TCGTCGCCGC AGAGCTTGCC CCGCGCGCCG CGCAGATCGA CAAGGACAAC CTGTTCCCCG CCGACATGTG GCGCAAGTTC GGTGAAATGG GCGTACTGGG GATCACTGTC AGCGAAGAGT ACGGCGGCGC GGGCCTGGGT TATCTGGCGC ACGTCGTGGC GATGGAAGAA ATCAGCCGTG GCTCGGCATC CGTGGCGCTT TCCTATGGCG CCCATTCCAA TCTGTGCGTG AACCAGATCA ACCGCAATGG CAGCCCGGCG CAAAAGGCCC GTTACCTGCC CAAGCTGATC AGCGGCGAAC ACGTTGGCGC GCTGGCCATG AGCGAACCCA ATGCAGGCTC GGACGTGGTG TCGATGAAAC TGCGCGCCGA CAAGCGCGGT GATCGCTACG TGCTCAACGG CAGCAAGACC TGGATCACCA ACGGGCCGGA TGCCGACACC TATGTGATCT ACGCCAAGAC CGACCTGGAA AAGGCAGCCC ACGGCATCAG TGCGTTCATC GTCGAACGCG ACTGGAAAGG CTTCTCGCGG GGCAGCAAGT TCGACAAGCT GGGCATGCGC GGCTCCAACA CCTGCGAACT GTTTTTCGAT GATGTCGAGG TGCCCGAGGA GAACCTGCTG GGCATGCTGG ATGGCGGAGT CAGAGTGCTG ATGAGCGGCC TTGATTACGA ACGCGTCGTA CTCTCCGGCG GACCGACCGG GATCATGCAG GCGTGCATGG ACGTGGTGGT GCCCTACATT CACGACCGCA AGCAGTTCGG CCAGAGCATC GGCGAGTTTC AGCTGATACA GGGCAAGGTC GCAGACATGT ACACCCAGCT CAATGCCAGC CGGGCCTACC TGTATGCGGT CGCCCAGGCT TGTGATCGCG GCGAGACCAC TCGCAAGGAC GCTGCGGGGG TGATCCTGTA CAGCGCCGAG CGCGCCACGC AGATGGCGCT GGAGGCCATC CAGATTCTCG GCGGCAATGG CTACATCAAC GAGTTCCCGG CGGGCCGACT GTTGCGCGAC GCCAAACTCT ACGAGATCGG CGCAGGCACC AGTGAAATCC GGCGCATGCT CATCGGTCGC GAACTGTTCA ACGAAACCCG TTGA
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Protein sequence | MSYPSLNFAL GETIDMLRDQ LQSFVAAELA PRAAQIDKDN LFPADMWRKF GEMGVLGITV SEEYGGAGLG YLAHVVAMEE ISRGSASVAL SYGAHSNLCV NQINRNGSPA QKARYLPKLI SGEHVGALAM SEPNAGSDVV SMKLRADKRG DRYVLNGSKT WITNGPDADT YVIYAKTDLE KAAHGISAFI VERDWKGFSR GSKFDKLGMR GSNTCELFFD DVEVPEENLL GMLDGGVRVL MSGLDYERVV LSGGPTGIMQ ACMDVVVPYI HDRKQFGQSI GEFQLIQGKV ADMYTQLNAS RAYLYAVAQA CDRGETTRKD AAGVILYSAE RATQMALEAI QILGGNGYIN EFPAGRLLRD AKLYEIGAGT SEIRRMLIGR ELFNETR
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