Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2464 |
Symbol | metH |
ID | 3367981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2852906 |
End bp | 2856625 |
Gene Length | 3720 bp |
Protein Length | 1239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652812 |
Product | B12-dependent methionine synthase |
Protein accession | YP_235541 |
Protein GI | 66045700 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.782684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0191622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACC GCAGCGCCCG CCATCAAGCT TTTCTCACTG CTCTGAAACA GAGGATCCTG ATCCTCGATG GCGGCATGGG CACCATGATC CAGAGCTACA GGCTCGAAGA ACAGGATTAC CGCGGCAAGC GTTTTGCCGA CTGGCCCAGC GATGTCAAAG GCAACAATGA CCTGTTGATC CTGACCCGCC CTGATGTGAT CGGCGCTATT GAGAAGGCTT ATCTGGATGC TGGCGCCGAC ATCCTCGAAA CCAACACATT CAACGCCACC CAGGTGTCCC AGGCCGACTA CGGCATGGAA TCGATCGTTT ACGAGCTGAA CGTCGAAGGC GCGCGCCTGG CGCGCAAGGT CGCAGACGCC AAGACACTGG AAACCCCGGA CAGGCCGCGC TTCGTGGCCG GTGTGCTGGG CCCCACCAGT CGCACCTGCT CGCTGTCGCC GGACGTCAAT AACCCCGGCT ATCGCAATGT GACCTTTGAC GAACTGGTCG AGAACTACAC CGAAGCGACC AAGGGGCTGA TCGAAGGCGG CGCCGACCTG ATCCTCATCG AGACCATTTT CGACACGCTC AACGCCAAGG CGGCGATCTT TGCCGTACAG GGTGTATTCG AAGAAGTCGG CTTTGAGCTG CCGATCATGA TTTCCGGGAC CATCACCGAC GCATCCGGGC GCACCCTGTC CGGCCAGACC ACCGAAGCGT TCTGGAACTC GATCAGCCAT GCAAAACCTA TCTCGGTCGG CCTGAACTGC GCACTGGGCG CCAGCGAACT GCGTCCTTAC CTGCAAGAGC TGGCCAATAA AGCCAACACC CATGTCTCCG CGCACCCCAA CGCCGGCTTG CCGAATGCAT TTGGCGAATA CGACGAACTG CCGAGCCAGA CGGCGAAGAT CATCGAAGAA TTCGCCCAGA GCGGCTTCCT GAACATCGTC GGCGGCTGCT GCGGTACGAC ACCGGCGCAC ATCAAGGCGA TCGCCGAGGC GGTTTCGGGT TACGCGCCGC GGGAAATTCC GGACATCCCC AAGGCCTGCC GCCTGTCGGG CCTCGAACCG TTCACCATCG ATCGCCAGTC GCTGTTCGTC AACGTCGGCG AGCGTACCAA TATCACTGGC TCCGCCCGCT TCGCCCGCCT GATCCGTGAA GACAATTACA CCGAAGCCCT CGAAGTCGCC CTGCAGCAGG TCGAAGCCGG CGCTCAGGTG ATCGATATCA ACATGGACGA AGGCATGCTC GACTCGAAGA AGGCCATGGT GACCTTCCTC AACCTGATCG CAGGCGAGCC GGACATCTCC CGCGTACCGA TCATGATCGA CTCCTCGAAA TGGGAAGTGA TCGAGGCCGG CCTCAAGTGC ATCCAGGGCA AGGGCATCGT CAACTCCATC AGCATGAAGG AAGGCGTCGA GCAGTTCATT CATCACGCCC GCCTGTGCAA GCGCTATGGC GCGGCGGTGG TGGTCATGGC CTTCGATGAA CAGGGTCAGG CCGACACCGA AGCGCGCAAA AAGGAAATCT GCAAGCGCTC CTACGACATT CTGGTCGACG AAGTGGGCTT CCCGCCGGAA GACATCATCT TCGACCCGAA CATCTTCGCC ATCGCCACCG GTATCGAAGA ACACAACAAC TATGCCGTGG ACTTCATCAA CGCCTGCGCC TACATCCGCG ACGAGCTGCC GTATGCGCTG ACCTCGGGTG GCGTGTCCAA CGTATCTTTC TCGTTCCGCG GCAACAACCC GGTACGCGAG GCGATCCACT CGGTGTTCCT GCTGCATGCG ATCCGTAATG GCCTGAGCAT GGGCATCGTC AACGCCGGGC AGCTGGAAAT CTACGACCAG ATCCCCGCCG AACTGCGCGA CTGTGTCGAA GACGTGGTGC TCAACCGCAA CCCCGAAGGC ACCGATGCAC TGCTGGCGAT TGCCGACAAG TTCAAGGGGG ATGGCAGCGT CAAGGAAGCC GAAACCGAAG AATGGCGCAG CTGGCCGGTC AATCAGCGTC TGGAGCACGC GCTGGTCAAG GGTATTACCA CCCATATCGT GCAGGACACC GAAGAGTCGC GCGTGGGGTT CGCGCGGCCT ATCGAAGTGA TCGAAGGCCC GCTGATGGCG GGCATGAACG TGGTCGGCGA CCTGTTTGGT GCAGGCAAGA TGTTCCTGCC CCAGGTGGTC AAGTCCGCGC GCGTGATGAA ACAGGCCGTG GCGCACCTGA TTCCGTTCAT CGAGCTGGAA AAGGGCGACA AGCCCGAAGC CAAGGGCAAG ATCCTGATGG CGACGGTCAA GGGCGACGTG CATGACATCG GCAAGAACAT CGTCGGCGTG GTACTGGGCT GTAACGGCTA CGACATCGTC GATCTGGGCG TAATGGTGCC TGCCGAGAAA ATCCTGCAAG TGGCCCGCGA CGAGAAATGC GACATCATCG GCCTCTCCGG CCTGATCACG CCGTCACTGG ACGAAATGGT GCATGTTGCC CGGGAAATGC AGCGCCAGGA CTTCCACCTG CCGCTGATGA TCGGCGGCGC GACCACCTCC AAGGCGCACA CGGCGGTGAA GATCGAACCC AAATACAGCA ATGATGCCGT GATCTACGTC ACCGATGCTT CCCGAGCAGT CGGCGTCGCG ACCCAGTTAC TGTCGAAAGA GCTGAAGCCG GCCTTCATTG AAAAGACCCG CCTGGAATAC GTCGAAGTAC GTGAACGCAC CTCGGCACGC AGCGCGCGTA CCGAGCGCCT GAGTTACGGC GCTGCAGTGG CTAAAAAGCC GCAGTTCGAC TGGGAAAACT ACACCCCGGC CCAACCGACG TTCACCGGCA CCCGGGTCCT GCAGGATATC GACCTGAACG TGCTGGCCGA GTACATCGAC TGGACGCCGT TCTTCATTTC CTGGGACCTG GCTGGCAAGT ACCCGCGCAT CCTCACCGAC GAAGTGGTCG GTGAAGCGGC CACCGCTCTG TACGCCGACG CCACGCAGAT GCTGCGCAAG CTGATCGACG AGAAGCTGAT CAGCGCCCGC GCGGTCTTCG GCTTCTGGCC AGCCAATCAG GTCAATGACG ACGATCTGGA AGTCTATGAC GATGACGGCA AGCCGTTGGC GAAGCTGCAT CACCTGCGCC AGCAGACCAT CAAGCCCGAC GGCAAGCCGA ACTTCTCGCT GGCCGACTTC GTTGCACCAA AGGACAGTGG CCTGACCGAC TACATCGGCG GGTTCATCAC CACAGCCGGC ATCGGCGCCG AGGAAGTCGC CAAGGCTTAT CAGGACAAAG GCGACGACTA CAACTCGATC ATGGTCAAGG CGCTTGCCGA CCGTCTCGCC GAAGCCTGCG CCGAATGGCT GCACCAGCAG GTGCGCAAGG AATACTGGGG TTATGCGCAG GACGAAGCGC TGGACAACGA AGCGCTGATC AAGGAGCAAT ACATGGGCAT CCGCCCGGCG CCGGGCTACC CGGCGTGCCC CGATCACACG GAAAAGGGCA CCCTGTTCGC CCTGCTCGAT CCGCTACCGG AAGGCAGCGC CGAGCACACG GCAGGCAAGA GCGGCGTGTT CCTGACCGAG CACTACGCGA TGTTCCCGGC TGCAGCGGTC AGCGGCTGGT ATTTCGCCCA TCCCCAGGCG CAGTACTTCG CCGTGGGCAA GATCGACAAG GATCAGGTCG AAAGCTACAC CGCTCGCAAG GGTCAGGACC TGAGCGTCAC CGAACGCTGG CTGGCACCGA ACCTGGGCTA CGACGAGTAA
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Protein sequence | MSDRSARHQA FLTALKQRIL ILDGGMGTMI QSYRLEEQDY RGKRFADWPS DVKGNNDLLI LTRPDVIGAI EKAYLDAGAD ILETNTFNAT QVSQADYGME SIVYELNVEG ARLARKVADA KTLETPDRPR FVAGVLGPTS RTCSLSPDVN NPGYRNVTFD ELVENYTEAT KGLIEGGADL ILIETIFDTL NAKAAIFAVQ GVFEEVGFEL PIMISGTITD ASGRTLSGQT TEAFWNSISH AKPISVGLNC ALGASELRPY LQELANKANT HVSAHPNAGL PNAFGEYDEL PSQTAKIIEE FAQSGFLNIV GGCCGTTPAH IKAIAEAVSG YAPREIPDIP KACRLSGLEP FTIDRQSLFV NVGERTNITG SARFARLIRE DNYTEALEVA LQQVEAGAQV IDINMDEGML DSKKAMVTFL NLIAGEPDIS RVPIMIDSSK WEVIEAGLKC IQGKGIVNSI SMKEGVEQFI HHARLCKRYG AAVVVMAFDE QGQADTEARK KEICKRSYDI LVDEVGFPPE DIIFDPNIFA IATGIEEHNN YAVDFINACA YIRDELPYAL TSGGVSNVSF SFRGNNPVRE AIHSVFLLHA IRNGLSMGIV NAGQLEIYDQ IPAELRDCVE DVVLNRNPEG TDALLAIADK FKGDGSVKEA ETEEWRSWPV NQRLEHALVK GITTHIVQDT EESRVGFARP IEVIEGPLMA GMNVVGDLFG AGKMFLPQVV KSARVMKQAV AHLIPFIELE KGDKPEAKGK ILMATVKGDV HDIGKNIVGV VLGCNGYDIV DLGVMVPAEK ILQVARDEKC DIIGLSGLIT PSLDEMVHVA REMQRQDFHL PLMIGGATTS KAHTAVKIEP KYSNDAVIYV TDASRAVGVA TQLLSKELKP AFIEKTRLEY VEVRERTSAR SARTERLSYG AAVAKKPQFD WENYTPAQPT FTGTRVLQDI DLNVLAEYID WTPFFISWDL AGKYPRILTD EVVGEAATAL YADATQMLRK LIDEKLISAR AVFGFWPANQ VNDDDLEVYD DDGKPLAKLH HLRQQTIKPD GKPNFSLADF VAPKDSGLTD YIGGFITTAG IGAEEVAKAY QDKGDDYNSI MVKALADRLA EACAEWLHQQ VRKEYWGYAQ DEALDNEALI KEQYMGIRPA PGYPACPDHT EKGTLFALLD PLPEGSAEHT AGKSGVFLTE HYAMFPAAAV SGWYFAHPQA QYFAVGKIDK DQVESYTARK GQDLSVTERW LAPNLGYDE
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