| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2440 |
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| Symbol | |
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| ID | 3367957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2824960 |
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| End bp | 2826282 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652788 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_235517 |
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| Protein GI | 66045676 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0811647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000336324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAACT CAGCAAAACT TCTGCTCGCC AGTTCCGTCC TCAGCACCTG TTTCGTGTTC
AGTGGCAGTG CCACCGCGGG GACCGTGACC ATCGCCACGG TCAACAACAG CGACATGATT
CGCATGCAAC GCCTCTCCAA GACCTTCGAA GAAAAGCACC CCGATATCAA GCTCAATTGG
GTCGTGCTGG AAGAGAACGT CCTGCGTCAA CGCCTGACCA CCGACATCGC CACCAAGGGC
GGCCAGTTCG ACGTGCTGAC CATCGGCATG TACGAAGCCT CACTCTGGGG TCAGAAAGGC
TGGCTGCAGG AAATGAAAGA CCTGCCTGAC AGCTACGATC TGAAGGATGT GTTCACATCA
GTACGCGACG GCCTGTCGGT GGACGACAAA CTGTTTGCCC TGCCGTTCTA TGCTGAAGCC
TCGATCACCT ACTACCGCAC CGACCTGTTC AAGGCCGCAG GCCTGACCAT GCCCGAGCGC
CCTACCTGGA CCCAGATCGC CGGGTTCGCC GAGAAACTGA CCGACAAGTC CAAGGAACAG
TACGGCCTGT GTCTGCGCGG CAAGGCTGGC TGGGGCGAGA ACATGGCGCT GATCACCACG
CTGGCCAACG CCTATGGCGG ACGCTGGTTC GATGAGCAGT GGACGCCACA GTTCGATCAG
CCAGAATGGA AGGATGCGCT GAACTTCTAC GTCAATACCA TGAAGAAATT TGGCCCGCCG
GGTGCCTCAA GTAACGGTTT CAACGAGAAC CTTGCGCTGT TCAACAGCGG CAAATGCGCC
ATCTGGGTGG ATGCCAGCGT GGCCGGTTCG TTCGTGACCG ACAAGAAGCA GAGCAAAGTG
GCTGACAGCG TCGGCTTCAC CTACGCCCCG CACGAAGTGA CCGACAAGGG CTCGTCGTGG
CTGTACTCGT GGTCGCTGGC GATCCCGACC AGCGCCAAGA ACACCAAGGA CGCTGCCGAG
TTCACCCAGT GGGCGACCTC GAAAGAGTAC GCCAAATTGG TCGCCGATAC CGACGGCGTG
TCCAACGTAC CGCCGGGCAC CCGCGCCTCG ACCTACACCG ACGAATACAA AAAGGCAGCA
CCGTTTGCCA ACATCACGCT TGAGTCGTTG AAGAAGGCCG ATCCCAAGTC GCCAACCCTC
AAACCCGTGC CTTACGTCGG CATTCAACTG GTCACCATTC CCGAGTTCCA GGCCATCGGC
ACCAGCGTCG GTCAGCAGTT CTCTGCAGCA CTCATAGGTC AGTCCACTGT GGATCAGGCC
TTGCAGAATG CGCAAACCGC TACCGCGCGC GACATGAAAC GAGCGGGTTA CCCGAAAAAG
TAA
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| Protein sequence | MKNSAKLLLA SSVLSTCFVF SGSATAGTVT IATVNNSDMI RMQRLSKTFE EKHPDIKLNW
VVLEENVLRQ RLTTDIATKG GQFDVLTIGM YEASLWGQKG WLQEMKDLPD SYDLKDVFTS
VRDGLSVDDK LFALPFYAEA SITYYRTDLF KAAGLTMPER PTWTQIAGFA EKLTDKSKEQ
YGLCLRGKAG WGENMALITT LANAYGGRWF DEQWTPQFDQ PEWKDALNFY VNTMKKFGPP
GASSNGFNEN LALFNSGKCA IWVDASVAGS FVTDKKQSKV ADSVGFTYAP HEVTDKGSSW
LYSWSLAIPT SAKNTKDAAE FTQWATSKEY AKLVADTDGV SNVPPGTRAS TYTDEYKKAA
PFANITLESL KKADPKSPTL KPVPYVGIQL VTIPEFQAIG TSVGQQFSAA LIGQSTVDQA
LQNAQTATAR DMKRAGYPKK
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