| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2439 |
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| Symbol | |
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| ID | 3367956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2823940 |
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| End bp | 2824872 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652787 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_235516 |
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| Protein GI | 66045675 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0447037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00027848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATACCT CAGCCTCCCC TGAACGCACG GACCTGTCCG GCGAACAGCA ACCGCTCAAA
AACCGTCGAT TCAAGCCGGG CTGGTTTCTG GTCAGTCCTT CGGTAGCGCT TCTGCTGGTG
TGGATGATCG TGCCGCTGGG CATGACCATT TACTTCTCGC TGATCCGCTA CAACCTGCTC
TCCCCCGGCG AAAACGAATT CGTTGGCCTG GAGAACTTCC AGTATTTCGT GACCGACAGC
GGCTTTTTGC CGGGTGCCGG CAATACCCTG CTGCTGGTCG GCAGCGTGCT GGCGATCAGT
GTGATCTTCG GCGTGCTGAT TTCGGCGCTG CTGGAGGCCA GCGAGTTTTT CGGTCGCGGC
ATCGTCCGTG TGCTGTTGAT CTCGCCGTTC TTCATCATGC CCACGGTCAG TGCGCTGATC
TGGAAAAACC TGATCTTTCA TCCGGTATCC GGCGTACTTG CGGCGGTCTG GAAGTTCTTC
GGCGCCGAAC CGATTGACTG GTTCGCCCAT TACCCGATGC TGTCGATCAT CATCATTGTG
TCCTGGCAAT GGCTGCCGTT CGCCATTCTG ATCCTGATGA CCGCCATGCA GTCACTGGAT
CAGGAGCAGA AAGAAGCAGC GCGGCTGGAT GGCGCAGGTC CGCTGGCGAT CTTCTGGCAC
CTGACCCTGC CGCACCTGGC GCGTCCGATT GCCGTGGTGG TGATGATCGA AACGATCTTC
CTGCTTTCGG TATTCGCTGA AATCTTCACC ACGACCAACG GCGGGCCGGG CTTTGCCTCG
ACCAACCTGG CTTACCTGAT CTACATCCAG GCGCTGCTGC AGTTCGACGT CGGCATGGCC
TCGGCGGGCG GGCTGATTGC CGTGGTCATA GCCAACATCG CGGCGATCAT CCTGATCCGG
ATGATCGGCA AAAACCTCAC CGACAAGTCA TGA
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| Protein sequence | MNTSASPERT DLSGEQQPLK NRRFKPGWFL VSPSVALLLV WMIVPLGMTI YFSLIRYNLL
SPGENEFVGL ENFQYFVTDS GFLPGAGNTL LLVGSVLAIS VIFGVLISAL LEASEFFGRG
IVRVLLISPF FIMPTVSALI WKNLIFHPVS GVLAAVWKFF GAEPIDWFAH YPMLSIIIIV
SWQWLPFAIL ILMTAMQSLD QEQKEAARLD GAGPLAIFWH LTLPHLARPI AVVVMIETIF
LLSVFAEIFT TTNGGPGFAS TNLAYLIYIQ ALLQFDVGMA SAGGLIAVVI ANIAAIILIR
MIGKNLTDKS
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