Gene Psyr_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2419 
Symbol 
ID3367934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2801530 
End bp2802204 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID637652765 
Producthypothetical protein 
Protein accessionYP_235496 
Protein GI66045655 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.768585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG AATCGTCCTC CACCGAATCC TCCCCGAATA CCGAGGCGTT ACAACTCAAC 
GGCACTGAAG TGCGCATTCT GGGCTGCCTG ATCGAGAAAC AGGCGACCAA CCCGGAAACC
TACCCGCTGA CCCTCAATGC ACTGGTGACG GCCTGCAACC AGAAGACCAG TCGTGACCCG
GTCATGAACC TCACCCAGGG TCAGGTCGGC CAGAGCCTGC GCGCCCTGGA AGGCCGCGGT
CTGACGCGGC TGGTCATGGG CAGTCGCGCC GATCGCTGGG AGCACAGGGT CGACAAGGGG
CTGGAGCTGG TCCCGGCGCA GGTGATACTC ACTGGCCTGT TGCTGCTGCG CGGGCCGCAG
ACCGTCAACG AGCTGCTGAC CCGCAGTAAC CGCATGCATG ATTTCGAGGA CAGCGAGCAG
GTCGTCCACC AGCTGGAACG CCTGATCGCC AGAGGTCTGG CGATGCTCGT GCCGCGCCAA
TCGGGCCAGC GCGAAGACCG TTACATGCAT CTGCTCGGTG ACCCGGAATC GCTACAGGAA
CTGCTTGCCG CTCGCCAACA GGCACCGGAG CGACATTCTG CAAGCCCGGC GGCCAACTCG
CGTATCGATG AACTGGAGGC ACGGGTCGCG GCCCTTGAAG AACGCCTGGC CAGACTGGAG
CACGCCGAGG AGTAA
 
Protein sequence
MSIESSSTES SPNTEALQLN GTEVRILGCL IEKQATNPET YPLTLNALVT ACNQKTSRDP 
VMNLTQGQVG QSLRALEGRG LTRLVMGSRA DRWEHRVDKG LELVPAQVIL TGLLLLRGPQ
TVNELLTRSN RMHDFEDSEQ VVHQLERLIA RGLAMLVPRQ SGQREDRYMH LLGDPESLQE
LLAARQQAPE RHSASPAANS RIDELEARVA ALEERLARLE HAEE