Gene Psyr_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2402 
Symbol 
ID3367917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand- 
Start bp2784425 
End bp2785534 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content63% 
IMG OID637652748 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_235479 
Protein GI66045638 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.724897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.894143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCG ATCGCATCGA AGACATCATT GAAGACTACC GCCAGGGCAA GATGGTGTTG 
CTGGTCGACG ACGAAGACCG GGAAAACGAA GGCGATCTGC TACTCGCCGC CGACTGCTGT 
TCACCACAGG CAATCAGTTT CATGGCTCGC GAAGCGCGCG GTCTGATCTG CCTGACGCTG 
ACCGACGAGC ACTGTCAGCG TCTGGGCCTG GAACAGATGG TGCCCAGCAA CGGCAGCGTA 
TTCGCCACCG CATTCACGGT ATCCATCGAG GCGACGACGG GTGTGACCAC CGGCATCAGC 
GCGGCAGATC GTGCGCGTAC CGTGCAGGCC GCCGTCAACC CGCACGCAGT ACCGGAGGAC 
CTGGTGCAGC CGGGCCATAT CTTTCCATTG CGCGCTCGCG ACGGCGGCGT GCTGACCCGC 
GTCGGGCATA CCGAAGCGGG CTGCGACCTG GCCCGGCTGG CCGGTTTCAC GCCAGCGTCG 
GTCATCGTTG AAGTGATGAA TGATGACGGC AGCATGGCCA GAAGACCCGA CCTGGAAGTG 
TTCGCCAAAA AGCACGGTAT TCGCATCGGC ACCATCGCCG ACCTGATCCA TTACCGCCTG 
AGCACCGAAC ACACCATCGT CAGGATTGGC GAGCGCGAAC TGCCGACCGT GCACGGCACC 
TTCCGTCTGT TCAGCTACGA AGACCGCATC GAAGGTGGCG TGCACATGGC CATGGTGATG 
GGCGACATCC GGCGCGACGC CGCCACGCTG GTACGCGTGC ATGTGGTCGA CCCGCTGCGC 
GACCTGGTCG GCGCCGAATA CAACGGGCCT GCCAACTGGA CACTCTGGGC CGCCCTGCAA 
CGTGTCGCGC AGGAAGGTCA CGGTGTGGTA GTGGTGCTGG CCAATCACGA ATCGTCCCAG 
GCGCTTCTGG AGCGCATCCC GCAACTCACC CAGCCACCCC GTCAATACAC CCGCTCGCAA 
TCGCGCATTT ATTCCGAGGT CGGTACGGGC GCACAGATCT TGCAGGACCT GGGCGTCGGC 
AAGCTGCGCC ACCTCGGCCC GCCACTGAAA TACGCAGGGT TGACCGGCTA CGATCTGGAA 
GTGATTGAAA GTATTCCGTT TCCCGGCTGA
 
Protein sequence
MAFDRIEDII EDYRQGKMVL LVDDEDRENE GDLLLAADCC SPQAISFMAR EARGLICLTL 
TDEHCQRLGL EQMVPSNGSV FATAFTVSIE ATTGVTTGIS AADRARTVQA AVNPHAVPED 
LVQPGHIFPL RARDGGVLTR VGHTEAGCDL ARLAGFTPAS VIVEVMNDDG SMARRPDLEV 
FAKKHGIRIG TIADLIHYRL STEHTIVRIG ERELPTVHGT FRLFSYEDRI EGGVHMAMVM 
GDIRRDAATL VRVHVVDPLR DLVGAEYNGP ANWTLWAALQ RVAQEGHGVV VVLANHESSQ 
ALLERIPQLT QPPRQYTRSQ SRIYSEVGTG AQILQDLGVG KLRHLGPPLK YAGLTGYDLE 
VIESIPFPG