| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2398 |
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| Symbol | |
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| ID | 3367913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2780195 |
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| End bp | 2781349 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652744 |
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| Product | ABC transporter |
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| Protein accession | YP_235475 |
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| Protein GI | 66045634 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0142955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.636582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG TGATCAAAGA CCCCGCCCAT CAGCCACACA ACACACTGGT CAGCCTGTGT
AATCTGAACA AGCACTATGG AAATTTCGCC GCCGTCGACG ACATTTCCCT GGACATCCAG
GACGGCGAAT TCCTGACCTT CCTGGGCTCC AGCGGCTCGG GAAAAAGCAC CACGCTGTCG
ATGCTCGCCG GCTTCGAAAC GCCCAGCTCG GGCGAGATTC TGGTGGGTGG CAAATCGCTG
GTGAATGTGC CGCCACACAA GCGCGACATC GGCATGGTGT TTCAGCGCTA CTCGCTGTTC
CCGCACCTGT CGGTACGCGA CAACATTGCC TTCCCGCTGG CGATCCGCAA GCTGCCTGCG
GCCGAGCGCG AGAAGAAAGT CGATGCGATG CTCAAGCTGG TTCAGCTGGA AGCCTTTGCT
CATCGGCGCC CGTCGCAACT GTCAGGCGGC CAGCAGCAGC GGGTCGCCAT CGCCCGAGCG
CTGGTTTACG AGCCGCGCAT CCTGCTGATG GACGAGCCTC TGGGCGCACT GGACAAGAAG
CTGCGCGAAG ACCTGCAGGA CGAACTGCGC CAGTTGCATC GCCGGCTGGG CATCACCATC
GTTTACGTAA CCCATGATCA GGAAGAAGCC ATGCGCCTGT CACAGCGCAT CGCCATTTTC
AGCCATGGCA AGATCGTCGG TCTGGGCTCG GGCTATGACC TGTATCAGGA TCCGCCGAAT
GCCTTCGTCG CCTCGTTTCT CGGCAACTCG AACTTCCTCA GGCTCAAGGC CCAGGGCAAT
GCCGTGGCAA CCTTCGAAGG CAGCACACTG GCGATTCGCC TGACCGCAGG GCTGAAGACC
GATCAGGAGG TGCTGCTCAT GGTGCGCCCG GAGAAAGCCC AGGCGCTGAG CGTGTCCCAG
GCAGCGGCCA TGCCGCTTGA AGCAGGCTGG AACGAGGTAA ACGCCACGGT TGCTGAAGTG
CTTTTTCTCG GCGAGAGCCA GACATGCTCG GTGGTCTCAG CCGGAGGCAC TGCCATGACG
GTCAAAGCGC TTTCTGCGAA CGGCATGGCG CTCAAGGCGG GCGACCCGGT GCGCGTGCGT
TGGGCCGCGG CAGACGCGTG CATCTACACC GAGTGGACCG ACAGCGACCT GAACAAGGCC
GCCGGCACGC ACTGA
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| Protein sequence | MSAVIKDPAH QPHNTLVSLC NLNKHYGNFA AVDDISLDIQ DGEFLTFLGS SGSGKSTTLS
MLAGFETPSS GEILVGGKSL VNVPPHKRDI GMVFQRYSLF PHLSVRDNIA FPLAIRKLPA
AEREKKVDAM LKLVQLEAFA HRRPSQLSGG QQQRVAIARA LVYEPRILLM DEPLGALDKK
LREDLQDELR QLHRRLGITI VYVTHDQEEA MRLSQRIAIF SHGKIVGLGS GYDLYQDPPN
AFVASFLGNS NFLRLKAQGN AVATFEGSTL AIRLTAGLKT DQEVLLMVRP EKAQALSVSQ
AAAMPLEAGW NEVNATVAEV LFLGESQTCS VVSAGGTAMT VKALSANGMA LKAGDPVRVR
WAAADACIYT EWTDSDLNKA AGTH
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