Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2373 |
Symbol | araH |
ID | 3367888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2751900 |
End bp | 2752889 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652719 |
Product | L-arabinose transporter permease protein |
Protein accession | YP_235450 |
Protein GI | 66045609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00546665 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.130195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATA AAAAAGAGGT GCGTATGTCT ACCGAATCCA GCCTGCAGGC TCCCCGTCAG GGCATGAACC TGCGTCGTTT CGCCGATGAC TGGGTGATGC TCCTGGCCGC CGTGGGGATT TTCCTGCTGT GTGCCGTGTT CATCGATAAC TTCATGTCGC CGCTGAACAT GCGCGGTCTG GGCCTGGCGA TTTCCACTGT AGGTATCGCT GCCTGCACCA TGCTCTTTTG CCTGGCGTCC GGGCACTTCG ACCTCTCGGT CGGTTCGGTG CTGGCTTGTT CCGGGGTGAT CGCCAGTATC GTCATCCGCG ACACCGACAG CGTATTTCTG GGTGTCTCGG CAGCCCTGGC GCTCGGGTTG GTCGTGGGTC TGATCAACGG CATTGTGATC GCCAAGCTGC GCATCAATGC CCTGATCACG ACTCTGGCAA CCATGCAGAT CGTGCGCGGC CTGGCGTACA TTTTCTCCAA CGGCAAGGCC GTCGGCGTTT CCAACGAGGA CTTCTTCATC TTTGGCAATG GCCAGGTGTA TGGCGTGCCG GTGCCGATCC TGATCACCAT TGCCTGCTTC ATATTCTTCG GCTGGCTGCT CAACTACACC ACCTATGGGC GCAACACCAT GGCCATCGGC GGCAACCAGG AAGCCGCGCT GCTGGCGGGT GTCCACGTGG ACCGCACCAA GATCATCATT TTCGCCGTCC ACGGCCTGGT CGGTGCATTG GCTGGCGTAG TCCTGGCTTC GCGCATGACT TCGGGGCAAC CGATGATCGG GCAGGGCTTC GAGCTGACGA TCATCTCTGC CTGCGTATTG GGCGGGGTTT CGCTGAGTGG CGGCATCGGC ATGATCCGGC ATGTGATCGC CGGGGTGCTG ATTCTTGCAA TCATCGAGAA TGCGATGAAC CTGAAGAACA TCGATACGTT CTACCAGTAT GTGATTCGCG GCACGATCCT GTTGCTGGCG GTGATCATCG ACCGCATGAA GCGCCGCTGA
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Protein sequence | MNNKKEVRMS TESSLQAPRQ GMNLRRFADD WVMLLAAVGI FLLCAVFIDN FMSPLNMRGL GLAISTVGIA ACTMLFCLAS GHFDLSVGSV LACSGVIASI VIRDTDSVFL GVSAALALGL VVGLINGIVI AKLRINALIT TLATMQIVRG LAYIFSNGKA VGVSNEDFFI FGNGQVYGVP VPILITIACF IFFGWLLNYT TYGRNTMAIG GNQEAALLAG VHVDRTKIII FAVHGLVGAL AGVVLASRMT SGQPMIGQGF ELTIISACVL GGVSLSGGIG MIRHVIAGVL ILAIIENAMN LKNIDTFYQY VIRGTILLLA VIIDRMKRR
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